SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|158316693|ref|YP_001509201.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|158316693|ref|YP_001509201.1|
Domain Number 1 Region: 19-89
Classification Level Classification E-value
Superfamily Homeodomain-like 6.48e-20
Family Tetracyclin repressor-like, N-terminal domain 0.0079
Further Details:      
 
Domain Number 2 Region: 273-339
Classification Level Classification E-value
Superfamily Homeodomain-like 2.54e-16
Family Tetracyclin repressor-like, N-terminal domain 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|158316693|ref|YP_001509201.1|
Sequence length 497
Comment TetR family transcriptional regulator [Frankia sp. EAN1pec]
Sequence
MSENEILRRASYGPTSPVVGARGSRTRTRIVDTALALFESQGFHGTSVDDIAKAAEVSRA
TLYQYFESKEQIFVELLEECGGALMRVVRRIGPLEPSELGFDNLHWWLGEWAWVYDRYAT
MFVQWANISSPGTAIPPLVSRFSAAYRERIAQRLTSSGVTGLAAADAALTLTALVSSCNY
TRHADAPLGREHPGTGPAARGTVMGTDYLTDNLAVLVQLILFPHTPVSVFAQLGREIPTP
RPPSTGERLWSVPAPAAGPPPALPPDGRLRQLSSRATVTVRRLLDAGIRCFTEKGYHQCS
VDDIVTEAGYARGTFYKYFDEKLDLLVALSDEAIETITELDGRLRRIGPTLGSDPAQLRS
WLGDAVAFHLRYLGVTRAWLDRRPCHPRLDAARRLVGERLHTGYTALLGPARWSHPLDPR
VASIAFFTLLERLPEAMVAAEPDRPLTEIVDLVATVLERAHLCPQSGPHDSQPAGADQDS
ARAAAASVPSGRHLPRP
Download sequence
Identical sequences A8LHA5
WP_020462412.1.9268 298653.Franean1_4931 gi|158316693|ref|YP_001509201.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]