SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|158317040|ref|YP_001509548.1| from Frankia sp. EAN1pec

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|158317040|ref|YP_001509548.1|
Domain Number 1 Region: 7-75
Classification Level Classification E-value
Superfamily Homeodomain-like 4.27e-17
Family Tetracyclin repressor-like, N-terminal domain 0.012
Further Details:      
 
Domain Number 2 Region: 104-183
Classification Level Classification E-value
Superfamily Tetracyclin repressor-like, C-terminal domain 0.00000000000016
Family Tetracyclin repressor-like, C-terminal domain 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|158317040|ref|YP_001509548.1|
Sequence length 208
Comment TetR family transcriptional regulator [Frankia sp. EAN1pec]
Sequence
MALVPASDSAATRQRLLDAAWRVLTRHGSQALSLDAVAREAAVSKGGLLHHFPTRASLID
ALYDRWNDEFESEVTARAVLDDRPGGWARAYLDATTAAGVQPRDSTAEVGFLAALIADPE
RLQRFRQRYEHWQNRLVQDRIDPAAATLIRMAADGMWLAELLGLAPPTGELRRQMLEALR
AMATPGGPAPAPGAPALGPSTAAEQAAR
Download sequence
Identical sequences A8L1Y2
gi|158317040|ref|YP_001509548.1| 298653.Franean1_5284 WP_020462751.1.9268

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]