SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|158314818|ref|YP_001507326.1| from Frankia sp. EAN1pec

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  gi|158314818|ref|YP_001507326.1|
Domain Number 1 Region: 24-134
Classification Level Classification E-value
Superfamily Homeodomain-like 1.43e-18
Family Tetracyclin repressor-like, N-terminal domain 0.078
Further Details:      
Domain Number 2 Region: 210-334
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.000000569
Family mu transposase, core domain 0.068
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|158314818|ref|YP_001507326.1|
Sequence length 363
Comment integrase catalytic subunit [Frankia sp. EAN1pec]
Download sequence
Identical sequences A8LBQ2
WP_020460571.1.9268 298653.Franean1_3003 gi|158314818|ref|YP_001507326.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]