SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|294101018|ref|YP_003552876.1| from Aminobacterium colombiense DSM 12261

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294101018|ref|YP_003552876.1|
Domain Number 1 Region: 6-317
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.36e-27
Family ABC transporter ATPase domain-like 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|294101018|ref|YP_003552876.1|
Sequence length 339
Comment DNA replication and repair protein RecF [Aminobacterium colombiense DSM 12261]
Sequence
MTPRRLEWAAGLNLLVGNNGSGKTNALEAIHILSGWGPFRSSRKSFLVNWDTEEKQAYLR
GYFSGETNLDIVATVGEKNIIQCDGKRITHGNVRSLIPALAFLPGDLAIVDGAPSVRRQF
LDRLCALLFPLYVRKMSDCRRALRHRVILLRERKDPSLTSKVLAPLVSWIWSTRAAAVDL
LKIGIQEFRILLPSDIVLTFERGGALDLQDPMQDYWESVRKWREKEHITGVPQVGPQRDD
MIITTKGQSVSIVMSRGQRRRTAVALMLAAGWAVERKLRRKPLLILDEIAAELDDRGRNI
LIDALVESSWQVFAATAESSMNGWPGTVWQVRQGNITPR
Download sequence
Identical sequences D5EC70
gi|294101018|ref|YP_003552876.1| WP_013047418.1.58668

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]