SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|294101553|ref|YP_003553411.1| from Aminobacterium colombiense DSM 12261

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294101553|ref|YP_003553411.1|
Domain Number 1 Region: 42-352
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.27e-43
Family Nitrogenase iron protein-like 0.0000166
Further Details:      
 
Domain Number 2 Region: 326-429
Classification Level Classification E-value
Superfamily Signal peptide-binding domain 1.8e-34
Family Signal peptide-binding domain 0.0001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|294101553|ref|YP_003553411.1|
Sequence length 449
Comment signal recognition particle protein [Aminobacterium colombiense DSM 12261]
Sequence
MFEALKERLESVFNTLKGKGKLSEEDVNAALREVRRALLEADVDYKVVKSLVDSIRGRCI
GQEVLDSITPGQQVVAIVYEELVSLMGEDVVPFIISSKPPTLCMMVGLQGSGKTTSAVKI
AKRIQNAHNPLVVACDLRRPAAIEQLKVLAQQSKVAFYGPSGGTQDVIKVAKEALAYAED
HLNDVIIFDTAGRLHVDEDLMEELSRLKDLVNPHEILLVVDAMTGQEAVKVATSFHEKLS
LTGVVLSKLDGDARGGAALAIRATTQVPIKFAGVGEGIDAIELFDAKRMAQRIIGMGDVM
GLAEKVQQVTSQEDVAKITKSLKKDKLTMEDLLLQFEQIEKLGPLDKVIDMLPGMGKMKE
LKNAELDPKRLKQSKAIIQSMTLEERRNPQIIKGSRRRRIAEGSGTTVQMVNQLLKQYDQ
MKQLWKYMGKGKKGFRLPKGLFGGGGFPF
Download sequence
Identical sequences D5EDQ5
WP_013047953.1.58668 gi|294101553|ref|YP_003553411.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]