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Domain assignment for gi|294101748|ref|YP_003553606.1| from Aminobacterium colombiense DSM 12261

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|294101748|ref|YP_003553606.1|
Domain Number 1 Region: 434-673
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.94e-58
Family Tandem AAA-ATPase domain 0.000000535
Further Details:      
 
Domain Number 2 Region: 672-878
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.02e-41
Family Tandem AAA-ATPase domain 0.00000392
Further Details:      
 
Domain Number 3 Region: 7-227
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 9.03e-31
Family Tandem AAA-ATPase domain 0.0028
Further Details:      
 
Domain Number 4 Region: 882-982
Classification Level Classification E-value
Superfamily TRCF domain-like 4.05e-21
Family TRCF domain 0.0014
Further Details:      
 
Domain Number 5 Region: 369-423
Classification Level Classification E-value
Superfamily CarD-like 0.00000000131
Family CarD-like 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|294101748|ref|YP_003553606.1|
Sequence length 1025
Comment DEAD/DEAH box helicase [Aminobacterium colombiense DSM 12261]
Sequence
MWKSGEQVHLPVDGGARAWILGGASVPLLVVFSDQRQAEDFVSDFENLWEGEIVRLLYEL
PLSVEGVRNKSLLLQRGETLSKWKQEKGILATSPGGLLSPFLTGEGVFPLRREMGEERGR
LLRWLEVAGYERVDLVWTPGQYVVRGFIVDIYDPAYALPIRIEFFDEIVESIRSFHPQSQ
MSAATLDEIEIHSITAAREKKLEEMIPDSCHTVLFEPSQIENKAESYRWLWEDLRHKAEV
SSLSTWPDFSLSLLTNKPKIRISAAVARSRLALPIQECPHFRGDMDKFRWNCQYWRQEGY
SIHLISSGTSLQNDNDLKDKLVFHKGSLSKGFIDEYRKIVLISDFEIGGLSLSPHSKPWR
ALPMDWKERLTENQLVVHEDYGVAVYRGVEEVASGGERFDSLILEFANKQRLLVPFMQIY
KIDPLPEEATAETVLDSLRGTRWKKAVEKTRERVREEVKNLVRLYARRELLKGYAFPVAS
EIYRHFVEAFPYVETPDQLRAEQEILQDMESSHPMDRLLVGDVGFGKTEIAMRAAFKASE
AGKQVVVLVPTTILAQQHYHTFRSRMAGFPIRVEVLSRFVSTSRQKRILEDTKKGLVDIL
IGTQRLLQKDIEFKDLGLLIIDEEHRFGVMHKEKLKDTREGLDVLTLSATPIPRTLSLSL
RGLRSFSIISTPPYNRVPVLTMVGPRKKNLIHRAVLQELNRGGQVFFVSNRINRLKGKYE
ELKIMFPEARISMAHGQMAEKDLERTMLDFYNGNLDILVCTTIVESGLDIPRANTLIVDD
AQELGLAQMYQLRGRVGRREEGAYAYFLYPETMPLQKETMERFEAISAFSDIGSGYSLAL
QDLQIRGSGDIIGVSQHGQDERVGYRFYYKMLEEEIARIRGELFSETPVDSELSGTIPST
YIPQDTIRITLYRRLLKSNDSKELNQLRKEIRDRFGPLPDSLTYLIDTVIVRISGASAGL
ASVVSGSDKTIVIIKNDRIHQRLCSFKGWIRTTDRIIGPGGYKGMSDLSEAIWSLLYKNA
KKNGG
Download sequence
Identical sequences D5EEA0
gi|294101748|ref|YP_003553606.1| WP_013048148.1.58668

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