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Domain assignment for gi|294101780|ref|YP_003553638.1| from Aminobacterium colombiense DSM 12261

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|294101780|ref|YP_003553638.1|
Domain Number 1 Region: 2-178,397-536
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.87e-44
Family ABC transporter ATPase domain-like 0.0055
Further Details:      
 
Domain Number 2 Region: 584-879
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.02e-43
Family ABC transporter ATPase domain-like 0.0028
Further Details:      
 
Weak hits

Sequence:  gi|294101780|ref|YP_003553638.1|
Domain Number - Region: 218-262
Classification Level Classification E-value
Superfamily ArfGap/RecO-like zinc finger 0.0732
Family Pyk2-associated protein beta ARF-GAP domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|294101780|ref|YP_003553638.1|
Sequence length 920
Comment excinuclease ABC subunit A [Aminobacterium colombiense DSM 12261]
Sequence
MVITGPSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGIQKKPDVDDISGLSPAISIE
QKGTSHNPRSTVGTVTEIYDYLRLLYGRLGVPYCPSCGKAVIRYSLDEIVDVIFRNYPDQ
RLEILSPQVRGKKGEFKNLFAQNREKGFMRVRVDGTIYWLEEEIALDKNKRHTIEVVIDR
LKVLDDRKGRISEAVEAALSLSGGYVLLVTEGGKEQLLTENYACPDCGISLPEIEPRLFS
FNNPYGACPDCSGLGSHEHFSEEHAIDPVRSVEEGALLPWKKKHYMLRKLYTFSQSKEWD
LTQPYGTLPKNVQNFILYGSDERLPMFFSDRGERHQYMGRYEGLLPWLEGRWNETESENV
LEELAGYRVEDICQTCHGYRLRPEALMVQLNHHTIDELVEMPVDRLLPVLKEMEFTENEQ
KIMGQVMIELEKRLSFLVDVGVGYLSLMRRADTLSGGESQRIRLATQIGSKLSGVLYVLD
EPTIGLHSRDTDRLLRTLRSIRDLGNTVVVVEHDRETMLAADAIVEMGPGAGEQGGEIVN
AGTAEEVLNTNALTGPYLRGEVSGCIRRRDVRNTSHWLTLRKVAHHNLKEIDVAIPSRVF
SCISGVSGSGKSSLLYDVLYKGMKRILDKDFRERAGKHLSIDGAEQFRNVVLVDQSPIGR
TPRSNPATYTGLFTLIRELFAELPESKIRGYAPGRFSFNVRGGRCEACSGAGSVKVSMLF
LPDVYVDCEVCGGTRYNRETLEVRYKGRNIADVLNMTVDDAFEFFKEIPRIASKLALIQE
AGLGYIRLGQSALTLSGGEAQRVKLAKELSKRFTGPTLYLLDEPTTGLFYTDVKKLLHIL
HRIVDQGNTVVTIEHNLDVLLSSDYIIDLGPEGGMEGGSIVTQGTPEEIIKSRQGYTSAY
LQEYARQLEREDHYERKTAS
Download sequence
Identical sequences D5EED2
gi|294101780|ref|YP_003553638.1|

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