SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|294101845|ref|YP_003553703.1| from Aminobacterium colombiense DSM 12261

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294101845|ref|YP_003553703.1|
Domain Number 1 Region: 1-194,318-520
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.18e-43
Family ABC transporter ATPase domain-like 0.049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|294101845|ref|YP_003553703.1|
Sequence length 550
Comment SMC domain-containing protein [Aminobacterium colombiense DSM 12261]
Sequence
MLEELSLRNIGGLDSAHLHFKGRFIAITGESGAGKSSIVRALEFASGKRAQSELIRAGEE
EAEVIALFFCPRTLQLPEEISSEEGNLFLKRVFTRNGRGKTFIQGKLFPLSLFNEVAAPL
LRIQSQFAQLELLDSDRQRDILDSYGGEEIICLKNELRSVFSNALLKEKELRSVEKKQKE
VIDRYENANSILQSFKSISPESNSEAIWEGRLERISKSIDEHTKLEQILARLTGGKTGEG
IADSIENLCLELTQIISPDTEKGSKYQELGNNALVFLQKLSQSLTVLLSEQSLSDLYAEQ
EEIENKLGTLRKLKRLAGVRTLEELTNYCKEAEMNLTWLNESYRRSEQSGAEAKKLRREA
SRLALELRKKRERTARSLEEAVNHSLRDMAMEDITFSITLSDLGKIKSTGADEISFLMAS
GMMPPGPVMKIASGGELSRLLLALQLALPDSQLPGTLVFDEVEAGLGGKAAVLAGYKLKQ
LAEKCRVILITHEATIAALAEQHFVVARQENKSFIKEIEKDERVLEIARMLSGNTTLLEA
QEHAGKLLSQ
Download sequence
Identical sequences D5EEJ7
gi|294101845|ref|YP_003553703.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]