SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|294102168|ref|YP_003554026.1| from Aminobacterium colombiense DSM 12261

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294102168|ref|YP_003554026.1|
Domain Number 1 Region: 5-427,457-633
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.05e-157
Family Tandem AAA-ATPase domain 0.00000000127
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|294102168|ref|YP_003554026.1|
Sequence length 660
Comment UvrD/REP helicase [Aminobacterium colombiense DSM 12261]
Sequence
MSVADSILDKLNPRQQEAVRYCDGPLLVLAGAGSGKTRVLAHKIAYLIEKGYASPKGILA
VTFTNKAAREMGERVQALVGAKASAMQVSTFHSFGLHFLFRNSDQLEFLGLRKGFAIFDR
NDSRSLVKKIMEDLKLDPKQIDPTNVLDHISKAKTEGNHKTLEPVGLEGIEHEVYRKYHD
ELRRQNAVDFDDLLILPLHLLMVDEKLREQEQSRLDWILVDEYQDVNKPQYFLLRRLIGT
KGNIMVVGDPDQSIYGWRGADMTMILNFEKDFPAAKVVVLDQNYRSTGNILKAANAVIIS
NERRRKKNLWTARDMGEKIYVLLAPNEYQEADFILSEMHRLHNFCGYRYGDMAVLYRINA
MSRIYEQKCIEKGVPYRVVRGTAFYDRKEIKDVLSFMRLAVNPLDGASLGRIANVPTRGI
GKKSQEKLMEGLGAIPEMEAEQLWRAVADGKDLGLTGKAKIGAMELGRHMFNIIKRSGSF
HDVLLYILDSIEYEDQLKKDDPEGWEERVENIRELGSLVTSGGDLAEVLAEVALFTDLET
TDMDDLEAVNFLTLHAAKGLEFPVVFLVGLEEAIFPHFKCLEVQESLEEERRLCYVGMTR
AEEKLYMSGARSRRLFGTVFRNGLSRFLWEIPDGNKNVDDRGEEERTNAGFGSDRRRWGW
Download sequence
Identical sequences D5EFH0
WP_013048565.1.58668 gi|294102168|ref|YP_003554026.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]