SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|294102426|ref|YP_003554284.1| from Aminobacterium colombiense DSM 12261

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294102426|ref|YP_003554284.1|
Domain Number 1 Region: 71-332
Classification Level Classification E-value
Superfamily GAF domain-like 5.1e-43
Family HrcA C-terminal domain-like 0.016
Further Details:      
 
Domain Number 2 Region: 1-83
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 5.9e-20
Family Heat-inducible transcription repressor HrcA, N-terminal domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|294102426|ref|YP_003554284.1|
Sequence length 339
Comment heat-inducible transcription repressor HrcA [Aminobacterium colombiense DSM 12261]
Sequence
MLTERQLEIVLAVVYEYIQTGEPAGSRTIARKYLRGCSAATVRNEMYDLEQMGYFYQPHT
SAGRLPTSRAYRLYVDSILHRRRVPPIGFEHWRNGISDQKQGIESLLSYASQLLGRVTNY
VGVAAISSLHEVEIQRVDFLCLGGNAVLVILILEGGLVHHNMVTLPCELSQDSLDELARR
INMVAVGHPWSEVREVLYSYVLEGLEKLSSACRAAILQMDALLQKYNYKLFTGGAQHILS
LPDFQDVSKLQAVISLLEEESSLVEMVGRCSVGGEVCVTIGDENPEVGMQNCSVLMVPSR
KRGRKTVLGIIGPMRMDYEKTIAVLEAMMADIEEDDTNS
Download sequence
Identical sequences D5EG78
gi|294102426|ref|YP_003554284.1| WP_013048823.1.58668

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]