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Domain assignment for gi|171056869|ref|YP_001789218.1| from Leptothrix cholodnii SP-6

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|171056869|ref|YP_001789218.1|
Domain Number 1 Region: 629-804
Classification Level Classification E-value
Superfamily Nitrite and sulphite reductase 4Fe-4S domain-like 3.66e-50
Family Nitrite and sulphite reductase 4Fe-4S domain-like 0.0022
Further Details:      
 
Domain Number 2 Region: 1-185
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 2.19e-39
Family FAD/NAD-linked reductases, N-terminal and central domains 0.0032
Further Details:      
 
Domain Number 3 Region: 145-304
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 8.55e-27
Family FAD/NAD-linked reductases, N-terminal and central domains 0.0026
Further Details:      
 
Domain Number 4 Region: 498-637
Classification Level Classification E-value
Superfamily Nitrite/Sulfite reductase N-terminal domain-like 5.23e-25
Family Duplicated SiR/NiR-like domains 1 and 3 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|171056869|ref|YP_001789218.1|
Sequence length 844
Comment nitrite reductase (NAD(P)H) large subunit [Leptothrix cholodnii SP-6]
Sequence
MKILVIGHGMVGHKFLESLDASGLRDARVTVLCEEPRPAYDRVHLSEFFSGKAAEDLSLV
APGFFERDNVLLRLNTRAVAIDRAGKTVTTAAGEVLAYDKLVIATGSYPFVPPLPGKDRT
DCFVYRTIEDLEGMLECGSRSKSGVVIGGGLLGLECAKALRDMKLQTHVVEFSPHLMALQ
VDEAGGRTLRAKIEKLGVGVHTQKNTVEIVDGETARHRMVFADGSQLETDMIVFSAGIRP
RDEIARQCGLEVGPRGGIVIDNRCRTSDADIYAIGECALWNGQIFGLVAPGYEMARVAAR
QLAGEAAAEFGGADMSTKLKLMGVDVASIGDAMGKTPGSRAYQFNDERKQVYKKLVVSEC
GKHLLGAVLVGDAAEYGTLLQMALNRIELPEAPEFLILPSSDGQARPALGVDALPDSAQI
CSCNNVSKGQLCAAVAGGASTIGELKACTQAGTACGGCVPLVTQVMKAEMKKQGLAVNNH
LCEHFAYSRQELFHIIKVEGIRSFDELLRRHGKGLGCDVCKPVAASILASVWNDFILKKE
LAGLQDSNDYFLGNIQKDGTYSVVPRMAGGEVTPDGLIAVGQVAKKYGLYTKITGGQRVD
LFGARVDQLPSIWEELIAAGFESGHAYGKSLRTVKSCVGSTWCRYGVADSVGLAIELENR
YKGLRAPHKIKFGVSGCTRECAEAQGKDVGVIATEKGWNLYVCGNGGMKPRHAELLASDL
SKQELIRYIDRFLMFYIRTADRLQRTSVWRDNLEGGLDYLKQVVLHDKLGLAAELEADMQ
NVVDTYVCEWKNAVTHPETRKRFRQFVNSDRTDPNVIFIQERGQIRPATPDEREARAADA
ELTA
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Identical sequences B1Y6X5
395495.Lcho_0178 WP_012345215.1.27902 gi|171056869|ref|YP_001789218.1|

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