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Domain assignment for gi|171057667|ref|YP_001790016.1| from Leptothrix cholodnii SP-6

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|171057667|ref|YP_001790016.1|
Domain Number 1 Region: 3-265
Classification Level Classification E-value
Superfamily PHP domain-like 0.000000000000902
Family PHP domain 0.011
Further Details:      
 
Weak hits

Sequence:  gi|171057667|ref|YP_001790016.1|
Domain Number - Region: 992-1072
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0728
Family Single strand DNA-binding domain, SSB 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|171057667|ref|YP_001790016.1|
Sequence length 1188
Comment DNA polymerase III subunit alpha [Leptothrix cholodnii SP-6]
Sequence
MSFVHLRTHTEYSVVDGTLRIDEIVKTAAKDGQPALAITDLANLFGAIKFYKEANKRGVK
PIIGADIWLEPEGIGAAGEVRPATRLLLLVQNEPGYLNLCEILSRAWVQNVQRNQAWVKW
EWLDELNGGLIALSGGLMGCVGQSLAQGDTVRAAELARKLAAIFPRRFYLEVQRAGLPGH
DALVLATVPLAAQLQLPVVATHPIQYLAPDDFDAHEARVCVAEGETIANPKRPRRFGRDQ
HFKTQAEMEALFADVPTALANTLEIARRCSLRLVLGKPQLPNFPTPTLADGSSMPMEDYF
RQLSYEGLEERLALLYPKPEKRDAERARYLERLEFELTTILKMGFPGYFLIVSDFIRWAK
ANGCPVGPGRGSGAGSLVAYVLSITDLDPLHYNLLFERFLNPERVSMPDFDIDFCQGNRD
RVIDYVKDRYGRPAVSQIATFGTMAAKAALRDIGRVLGMGYGHVDSIAKLIPAPPGKSVT
LARVPEKAEDRDGGVIYARLEAPELEEREKNEEEVAELLSLAMRVEGMVRNIGMHAGGVL
IAPGKITDFCPLYQQPGSDSAVSQYDKDDVEAIGLVKFDFLGLATLTILELAKEFIVARH
ENRKDFAFETIPLDDAAVYKLFSDGLTEAVFQFESGGMQRMLKDAKPSRLEDLIALNALY
RPGPMDLIPSFVARKHGKEPVEYPHPMVEWVLSETYGIMVYQEQVMQTAQVLGGYSLGGA
DMLRRAMGKKKAEEMAEHRAIFRKGAAGNNISQDKADEIFDLMEKFAGYGFNKSHAAAYS
LLAYHTAWIKVHHTAEFFAANMTIELDDTDKLRVLRQDALKFGVQFESPDVNVGVYRFEP
APGKAGNKLIRYGLGAIKGTGQGAIEAIIAARNEGGPFRSIFDFCARVDRKSINKRVIEA
LVKAGAFDKLHPKGLDGRAELLASVGLALEYAGTQAAHADQSGLFDFGGGDDHGSSTREP
DYVAAETWDVKQRLSHEKIAIGYFLSGHLFDQVAAEVRQFAKRRIEDLSDSRDPQTLAGI
VTDLRIVNGHRGKVAIFKLDDKTAAIEAVVAEELLNANAALLKDDELLILQGKAQPDRFS
GGVRFNVIQILDLPTARCRHGRYLRVPATDNLPPVDQVLRDFPARSISTEHGELVQGVPI
RLVVERESACGEVDLGEAARFYPSDEALKLWQVGSQGKARLVYSEEQA
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Identical sequences B1Y2N5
395495.Lcho_0980 WP_012346013.1.27902 gi|171057667|ref|YP_001790016.1|

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