SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|171058058|ref|YP_001790407.1| from Leptothrix cholodnii SP-6

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|171058058|ref|YP_001790407.1|
Domain Number 1 Region: 193-265
Classification Level Classification E-value
Superfamily C-terminal effector domain of the bipartite response regulators 5.44e-18
Family GerE-like (LuxR/UhpA family of transcriptional regulators) 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|171058058|ref|YP_001790407.1|
Sequence length 267
Comment LuxR family transcriptional regulator [Leptothrix cholodnii SP-6]
Sequence
MPQPQSVERVPVEPEVSLQPQDIEALALNLDASLNVHTRSHFFTWTQGLLQGLIHHEALI
CVLRCPESATWRVDSFSTRVADSTVFAAPLLRDIALVPRLVDAWKGAHHLPIVLPARRDG
VLGSGAWVAELERIAATRLAVHGCHDIDGDANCLFLLACQGDSPDPRELCLLRLVVPFLR
EAWVRSQMIGGRHDDLPAPHGHAVITVREQEILKWIYLGKSNSEIGQILGISALTVKNHV
QKMLHKLNVVNRAQAVGRAIEAHLIQI
Download sequence
Identical sequences B1Y715
395495.Lcho_1374 WP_012346404.1.27902 gi|171058058|ref|YP_001790407.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]