SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|170741466|ref|YP_001770121.1| from Methylobacterium sp. 4-46

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|170741466|ref|YP_001770121.1|
Domain Number 1 Region: 5-126
Classification Level Classification E-value
Superfamily YjgF-like 1.73e-36
Family YjgF/L-PSP 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|170741466|ref|YP_001770121.1|
Sequence length 126
Comment endoribonuclease L-PSP [Methylobacterium sp. 4-46]
Sequence
MRGRIDGGSPFEKAYGYSRAVVEGGFVFVSGTTGYDYAAMTMPEDAAAQAEACWRTIAAV
LEQAGASLERVVRATYYVTDRAEAEAVLAVCGRVMGAVRPAATLVVVAGLLRPEMKVEIE
VTALLP
Download sequence
Identical sequences B0UQK1
426117.M446_3282 gi|170741466|ref|YP_001770121.1| WP_012333087.1.13143 WP_012333087.1.41957

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]