SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|158340215|ref|YP_001521385.1| from Acaryochloris marina MBIC11017

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|158340215|ref|YP_001521385.1|
Domain Number - Region: 192-223
Classification Level Classification E-value
Superfamily BRK domain-like 0.00314
Family BRK domain-like 0.012
Further Details:      
 
Domain Number - Region: 300-333
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00869
Family Recombinase DNA-binding domain 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|158340215|ref|YP_001521385.1|
Sequence length 557
Comment transposase [Acaryochloris marina MBIC11017]
Sequence
MELFQQFLPCQDTLHLDSWDLDSTNHQMTFHVSSTQALACCPVCHQTSHRVHSRYERTLR
DLPCVEFCLTILLQVCKFFCSNKTCKRRIFTERLPQVAVPWARRTVRFAEHLSSIGLALG
GAAAARLSYQINYGSSRNTMLRALFKLPLPSVTTPKILGVDDFALRRGHEYGTILVDLEK
HQPIVLLTDRKADTLADWLNEHPGVEVISRDRSKAYKSGASEGAPDALQVADRFHLLQNL
EEILENVFSSHSQVIKTVEYTLLKATLAEHQDTEAMSQPVVKPQVDPNSRKAQNRARRLE
KYEQTHALRKQGYLIKDIAHHLGIGKRTVYTYLAADTFQEYKTHPRRGWSGLNPYKAYLL
EQWNKGRQNSKQLLAEIQQQGFKGSYTMVVRYTHKLRQSLPPQPPRDSLNELPGRGPVPE
AQELIQKPLTVQRAAWLVMRKVENLTEEDETILEQLSSQPELSKAIDLAQSLLFIVRKRL
PQHLDPWLDRAKNSALKPFQSFAKGLLDDYEAVKAALTLEVSNGQVEGQNNRLKMVKRQM
YGRAGLDLLNKRLVLMS
Download sequence
Identical sequences A8ZLP4
WP_012166248.1.67183 gi|158339878|ref|YP_001521048.1|NC_009927 gi|158340215|ref|YP_001521385.1|NC_009927 gi|158339194|ref|YP_001520371.1| gi|158339196|ref|YP_001520373.1| gi|158339878|ref|YP_001521048.1| gi|158340215|ref|YP_001521385.1| 329726.AM1_6120 329726.AM1_6122 329726.AM1_B0008 329726.AM1_B0353

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]