SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|170780574|ref|YP_001708906.1| from Clavibacter michiganensis subsp. sepedonicus

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|170780574|ref|YP_001708906.1|
Domain Number 1 Region: 9-140
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.28e-23
Family MarR-like transcriptional regulators 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|170780574|ref|YP_001708906.1|
Sequence length 149
Comment MarR family transcriptional regulator [Clavibacter michiganensis subsp. sepedonicus]
Sequence
MTDHDLRTLLGDLVTAGHRLTRLAAHEVGGSSSPAVWRTLSVLVTWPGGMRLGVLAERSR
VSQPTTTKIVRSLVGQGWIAQVTDPSDARASLLEITPAGRAALDDWRDRLATALVPRFAD
LPADDVAVLARAVEVVMSRIDGAPASARD
Download sequence
Identical sequences B0RIC8
31964.CMS_0118 gi|170780574|ref|YP_001708906.1| WP_012297600.1.12855 WP_012297600.1.13751 WP_012297600.1.33835

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]