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Domain assignment for gi|294506457|ref|YP_003570515.1| from Salinibacter ruber M8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|294506457|ref|YP_003570515.1|
Domain Number 1 Region: 142-365
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 1.83e-66
Family MurCDEF 0.0001
Further Details:      
 
Domain Number 2 Region: 367-521
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 2.09e-47
Family MurCDEF C-terminal domain 0.0000522
Further Details:      
 
Domain Number 3 Region: 59-141
Classification Level Classification E-value
Superfamily MurE/MurF N-terminal domain 4.32e-17
Family MurE/MurF N-terminal domain 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|294506457|ref|YP_003570515.1|
Sequence length 522
Comment UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Salinibacter ruber M8]
Sequence
MPFSRRPSEPMPGPTSAHTERISEWEPDPLPWSALRRRLRKADLLDETIAGAEAPDPDTL
AIGGLTDDSRAVTPGGGFVAIRGVDADGHSFIDMAVDNGARLVVCEALPTRARERFPGVV
FARVTDTRTALAEGAAALHGDPADEMRLVGVTGTNGKTTVAYLVHHLLEALGETAGLLST
IEVRAGGETTAPALTTPGPLVLHRTLRRMVDRGCTACAMEVSSHALDQDRVHGLDYEVAI
FTTLSVDHLDYHDTLDDYRAAKKTLFDALGPDATALYNTDDEAGPTMVADTEARVVSFGL
DRDADIEATVLEARLDGQRVRLDGHERDTQLAGRFNASNMAAAYGTGTALGHVPEAVADA
LADAPPVPGRVEPLRFEDGTTVIIDYAHTPDALENVLRTVRDTTPAKAALWCVFGCGGDR
DAGKRPTMGRIAERLADRVIVTSDNPRTEAPVAILRDIRDGVERPESMRWIVDREEAIQA
AADETMPGDVVVIAGKGHETTQTIGTDTRPFDDREVARRYFG
Download sequence
Identical sequences D5H6A8
gi|294506457|ref|YP_003570515.1| WP_013061081.1.91540

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