SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|261419368|ref|YP_003253050.1| from Geobacillus sp. Y412MC61

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|261419368|ref|YP_003253050.1|
Domain Number 1 Region: 258-441
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.88e-43
Family Tandem AAA-ATPase domain 0.0039
Further Details:      
 
Domain Number 2 Region: 530-704
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.35e-34
Family Tandem AAA-ATPase domain 0.006
Further Details:      
 
Weak hits

Sequence:  gi|261419368|ref|YP_003253050.1|
Domain Number - Region: 196-242
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.0356
Family Lrp/AsnC-like transcriptional regulator N-terminal domain 0.054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|261419368|ref|YP_003253050.1|
Sequence length 801
Comment primosome assembly protein PriA [Geobacillus sp. Y412MC61]
Sequence
MKVASVIVDVPSRQTDRPFDYWIPERWQGVIQPGMRVTVPFGARRLQGFVVDVKDHSDIK
QLKPIEHVLDVVPVLNEELLDLGRYLTETTLCFAISAYQAMLPAAMRAKYEKTLRLTDEE
KRGRLPDEVKPLFAGRTEAPWKEVEAAGLWRAAQKAVQQGVLEAVYKVKEKAGKKTVKHA
ALAIPSEQAKQELGSLPARQKEVLSFLLEKGEAAPVAELQAVLGVSSAPLKALVDKGFVV
LNDVEVYRDPYEHRTFQPSEPPALTRAQEAALAKIAASVRAGEHRTFLLYGVTGSGKTEV
YMQAIDEALRQGKEAIVLVPEISLTPQMVERFKSRFGSKVAVLHSGLSVGEKYDEWRKIH
RKEVQLVVGARSAVFAPFENLGMIIIDEEHETSYKQEEMPRYHARDVAIYRARRHSCPVV
LGSATPSLETFARAAKGVYELLELPERISDRGLPDVHVVDMREELRSGNRSMFSRRLLDE
LRGRLERGEQAVLLLNRRGYSTFVMCRSCGYVIRCPHCDISLTYHRAGERMKCHYCGHEE
PLAPRCPSCGSEHIRFFGTGTQKVEEELTRLLPKARVIRMDVDTTGRKGAHEELLSRFAA
KEADILLGTQMIAKGLDFPDVTLVGVLAADTMLHLPDFRAAEKTFQLLTQVSGRAGRHEL
PGEVIIQTYTPEHYSIELAARHDYRAFYQREMALRKAHGYPPYYYLTLITAAHEEAPAAA
KAAEKIAAYLRKHLSHEAVVLGPVASPIARLHDRYRYQCMIKYKREPNLTAALKAIIDRY
QADAAHGGVMVAIDTNPYMMM
Download sequence
Identical sequences A0A0E0TA86
544556.GYMC61_1951 gi|319766183|ref|YP_004131684.1| gi|261419368|ref|YP_003253050.1| WP_013523367.1.50933 WP_013523367.1.80994

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]