SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for gi|291299066|ref|YP_003510344.1| from Stackebrandtia nassauensis DSM 44728

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  gi|291299066|ref|YP_003510344.1|
Domain Number - Region: 148-246
Classification Level Classification E-value
Superfamily Homeodomain-like 0.000555
Family Psq domain 0.091
Further Details:      
 
Domain Number - Region: 80-104
Classification Level Classification E-value
Superfamily His-Me finger endonucleases 0.0212
Family Intron-encoded homing endonucleases 0.019
Further Details:      
 
Domain Number - Region: 62-113
Classification Level Classification E-value
Superfamily Multiheme cytochromes 0.0279
Family Di-heme elbow motif 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|291299066|ref|YP_003510344.1|
Sequence length 271
Comment hypothetical protein Snas_1548 [Stackebrandtia nassauensis DSM 44728]
Sequence
MHAHLRRRINEFGIDIGHFRRADNTGRPSSRRMSPSELLVRRPDGAKRLDAERLRRALIE
LGTAYECVACGTGREWMGRPLTLHVDHINGEFLDCRRENLRFLCPNCHSQTDTYAGRNRR
RYGGSSLPHVKRTKDAAWVTTESDLAEVFKRVDSGEISVVRAVEQIGCSRGHYYRLRERV
AESRSAAMRKQVRNAAREVRDVAIIEFALDHPELGPKPIAARLSKATDGELRVAHGTVAN
VLRKAGLQYRANREKAAKSRREIEGLDFVTA
Download sequence
Identical sequences D3PW94
gi|291299066|ref|YP_003510344.1|

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