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Domain assignment for gi|284176401|ref|YP_003406676.1| from Haloterrigena turkmenica DSM 5511

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|284176401|ref|YP_003406676.1|
Domain Number 1 Region: 724-891
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000000165
Family Extended AAA-ATPase domain 0.072
Further Details:      
 
Weak hits

Sequence:  gi|284176401|ref|YP_003406676.1|
Domain Number - Region: 957-1014
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.000367
Family P4 origin-binding domain-like 0.05
Further Details:      
 
Domain Number - Region: 1056-1144
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0154
Family Cold shock DNA-binding domain-like 0.083
Further Details:      
 
Domain Number - Region: 245-278
Classification Level Classification E-value
Superfamily Prim-pol domain 0.0545
Family PriA-like 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|284176401|ref|YP_003406676.1|
Sequence length 1285
Comment phage/plasmid primase, P4 family [Haloterrigena turkmenica DSM 5511]
Sequence
MSDLSPSEVRDHYRKASSVFDKLGDVANNPTLVKNDHYGWYIKRDNDNVDELEEGWTQRG
RVATADDYPEIVDRISRSLYAITTYKKPDAVARERPCRYNSDDGVTEWMGDETPMPEWGD
VVALPAWGDIDLADELKGERETLSAEKRETVERTLDAYIGEFAALYGGNRDAIMALDSVG
GAYIFGPPEATIPIARLFKDDENASARVFEELNDRINDYLREAEQRVNDRVTGASDVITP
DWVNNANRAYKAPLSIHSSHDAVVTPIDTENVEYTYTPIDAVGETTISTAVEWAEQYTAV
EYTELAAELVETLWPDLYDEQSNATWKDVLEFWVEKEREREKAEQRRREKAERERAKRLQ
ELETTVTGQDVTPHKTDVYAALDNVDTAEIVRHYACDAWGTGDSTGSNKTEFNPSWRQST
SGSSCYVDHSSNTFGDPGDGGGGYAAKAMALGEGIITDASADIRGEKWAKAVDALRSKAG
ENIPVWIPGKGSLKADGGEYEQTPHWAVVKAAVTLDVCDPANLEERESDDGGTYTGLPDK
ETYNATLDALEEHGVEHARERYVTEKRVNAGAVTWGQIRDLYSDPETPDKFARHAAVIKL
CKENEYVTTRDTEEIYTYYDPDGVFERGGERDIDHTIQRELGPHYSQHEKREILGHIRAR
TYVDREEFNAEEIDADLVCLGNGVYDFDAGKLREHDPKYLFTQSIPWDYPENPESAECPA
IEEFMDDITQREADKLTMYEFIGHALLPHYDYKAFMVLFGPGDNGKTTFYNVVEQLLGGQ
SNISAAEMAEIAENRFRAETVIGNYANIAAEMNARKIDDMGMIKKMTGGDTFQVEPKGKP
AYEVQNTATMMFGCNEPPVLPERGRKIATRLYPIELPYEFKNDPSPNNPFEKQGRPQSEL
LAEITTESELQGLLVKAIEGAHRLIDRNGEFSLPETAEERMELYEQHSDPIKQFSVKCLE
NESGKRVAKDDVYNVYVEFCRETDAKVTSKSVFFKKLRQTTFSYSETRPRADGDGERKLY
LDNATFADQAARYTDEVLFEYAETDTDTDEGSSEPLAVTDLEPGMHQEPVRAVVAEKLDA
PDWLEGKGHIVDGEGAIMPYVIEGGDIFASVDEGDELVIRNVKVEEQNGVSTAVLSTITE
VETASREENQDPLPSDGDKKKTAADGSGAYPEADETAETAERDDSDSDPAEHTRDGDDAD
TGSDAGGQALTTTELPPEDATGPLPNARRLRLILEENGDRLSKSDLYGRAADRFDMSPGN
AETAVKKGCHHGILRDAGGGEIEKV
Download sequence
Identical sequences D2S3Q6
WP_012946242.1.92728 gi|284176401|ref|YP_003406676.1|NC_013749 gi|284176401|ref|YP_003406676.1|

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