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Domain assignment for gi|184154989|ref|YP_001843329.1| from Lactobacillus fermentum IFO 3956

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|184154989|ref|YP_001843329.1|
Domain Number 1 Region: 255-555
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 1.03e-91
Family DNA repair protein MutS, domain III 0.00000129
Further Details:      
 
Domain Number 2 Region: 557-789
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.36e-62
Family ABC transporter ATPase domain-like 0.000000573
Further Details:      
 
Domain Number 3 Region: 3-113
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain I 8.5e-43
Family DNA repair protein MutS, domain I 0.000023
Further Details:      
 
Domain Number 4 Region: 121-268
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 2.62e-28
Family DNA repair protein MutS, domain II 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|184154989|ref|YP_001843329.1|
Sequence length 880
Comment DNA mismatch repair protein MutS [Lactobacillus fermentum IFO 3956]
Sequence
MASKQTPMMEQYQRVKDQYPDAFLFYRLGDFYEMFNEDAVKGAQLLELTLTSRSKSKDNS
IPMCGVPHRAVDNYVDILIDKGYKVAICEQMEDPKTTKGMVKREVTRLVTPGTTMDLAGD
AARQNNYLTALKQEQGGYNLAYADLSTGELKVTKVSNEAAAINELVNLQTREVVTEPEVS
ASLLDQLTKRNILRSTQGQVVNQAEVAYLSQDLTDAGQRDVVALLVSYLLTTQKRSLAHL
QRAVAYQLSSFMKIDHRSKVNLELTTNLRSGKRQGTLAWLLDETKTAMGSRLLKQWLDRP
LLDQAKIERRYDRVQELLDHYFERQNLQEELIKVYDLERLAGRVAYGSVNGRDLIQLKTS
LEQVPKIKYILQTLDVPAFDDLEQALDPLEDVAGLIDRAIAPEPPISVTDGGVIRDGYNH
QLDEYRGAMQNGKQWIADLQEQERRATGINNLKIGYNHVFGYYIEVTKANIDKLPADRYE
RKQTLVNAERFATPELKEKESLILGAQDKSTALEYELFVKVREAVKEQIDRLQKLAANLA
ALDVIQAFAKVAEDYHFVRPSLNHDHQLQIEDGRHPVVEKFMGHQEYVPNDVLMGGDTSI
LLITGPNMSGKSTYMRQLALTAVMAQMGCFVPAKRAQLPIFDQIFTRIGAADDLVSGEST
FMVEMMEANNALQNATADSLILFDEIGRGTATYDGMALAQAIIEFVHNRVGAKTLFSTHY
HELTALEGELDHLQNVHVGATEENGELVFLHKVTPGPADKSYGIHVAKLAGMPTPLLTRA
NQILTSLEGQETAAVPSRGVEPPAPVIEPTPAKEQTPVKEQTTPLVEESSGQLELFATAP
VEKKDGKADKLARQVKNLDLMSMTPMDVMNQVYKWQQNLK
Download sequence
Identical sequences A0A0N7CMC8 B2GB17
gi|184154989|ref|YP_001843329.1| WP_012390970.1.34248 WP_012390970.1.36713 WP_012390970.1.74232 WP_012390970.1.88712 WP_012390970.1.99973 334390.LAF_0513

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