SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|407461819|ref|YP_006773136.1| from Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|407461819|ref|YP_006773136.1|
Domain Number 1 Region: 4-187
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.52e-36
Family GHMP Kinase, N-terminal domain 0.00024
Further Details:      
 
Domain Number 2 Region: 171-310
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 1.66e-29
Family Mevalonate kinase 0.0029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|407461819|ref|YP_006773136.1|
Sequence length 313
Comment mevalonate kinase [Candidatus Nitrosopumilus koreensis AR1]
Sequence
MKSKASAPGKVILFGEHFVVYGVKAILCAIDKRITVIAEDTSERKISIKSNIGELELEPN
KPISEINSPLKPFYYLANKVIQNKNSGIKISVESEIPLGVGLGSSSACCVAGAAAISKLF
GNVSKDEILKLAIEAEKTIFQNTSGADCTVCTFGGLMEYDKRKGFTKIGSEPNFHLVIAN
SNVEHSTESVVKEVSKFKERNEKEFSKLCEDESLLIENVLELLKENNITELGQKIIQNQE
YLETIGVSNDKLRKMIQIGYETSFGAKITGAGGGGCIFALTDESNVENTIREFKNKNYEC
FSVKIDFKGLDTF
Download sequence
Identical sequences K0B3Z2
WP_014962583.1.70052 WP_014962583.1.82955 gi|407461819|ref|YP_006773136.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]