SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|186680837|ref|YP_001864033.1| from Nostoc punctiforme PCC 73102

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|186680837|ref|YP_001864033.1|
Domain Number 1 Region: 213-501
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 6.54e-56
Family Integrin alpha N-terminal domain 0.005
Further Details:      
 
Domain Number 2 Region: 884-996
Classification Level Classification E-value
Superfamily CalX-like 1.7e-29
Family CalX-beta domain 0.0014
Further Details:      
 
Domain Number 3 Region: 770-887
Classification Level Classification E-value
Superfamily CalX-like 9.29e-20
Family CalX-beta domain 0.0016
Further Details:      
 
Domain Number 4 Region: 1097-1239
Classification Level Classification E-value
Superfamily beta-Roll 4.45e-17
Family Serralysin-like metalloprotease, C-terminal domain 0.0005
Further Details:      
 
Weak hits

Sequence:  gi|186680837|ref|YP_001864033.1|
Domain Number - Region: 1001-1087
Classification Level Classification E-value
Superfamily CalX-like 0.0575
Family CalX-beta domain 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|186680837|ref|YP_001864033.1|
Sequence length 1241
Comment Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
Sequence
MPTNTAPTLDNAGNPILTAITQDVTDTENLGTLVSAIIATGTGGNPITDVDTGAVEGIAV
IGVDNTHGIWQYSTNGGNNWINFAVSAISATLLRDTEKVRFIPNAGYNGTAEITFRAWDA
SDGNASGTTGVNPGVGGGTTAYSSATETASISILPLVGLRPYSIIVADLNKDGNTDLVTA
NKSSQSVSVLLGKGDGTFKPATTFSVVGFNGLNPYSVAVADFNKDGKLDLVTANNVSNNI
SVLLGKGDGSFQAAVNFDLPSGSAPISIAVGDFNKDGKSDIVTANNASQNISVLLGNGTG
GFGSAINFKVPSRPTSVIVGNFNGDGISDLAVTSSYFNNVSILLGNGDGTFNSATQFDVG
TNPHSVVIGDFNKDGKSDLAVANSDSNNVSVLLGNGDGTFKPATNFNVGLNPVSVTVIDF
NGDGKSDLAVANADSNTVSVLLGDGIGSFGNATNFDVGTTPYAVTVGDFDKDGKSDLAVA
NSESRNVSILLNNRAESYDPVPPQPILINEIFFDPPSTDGPREYIELRGTPGETLAPGTY
LVGIEGDSGSPNPGNVQDIFDLSGKQFGSNGLLVLLQKGNPYVNVVNPNANIVTNAGTGA
GWGSGASSSIGHTGQTGATDIENNSVSFFLIQTTTAPTLSNDIDSNDDGIVDPAVYSKWT
VLDSVSVLDGTSTTDRAYSSIVFRKGSNGGSVPANATVVDTSFIAGYVGRSGNTTGSTAS
DWVASAITTGTAPNFALATAPNTSPGNFAEQPLNHIGNTNFAPPANINYAISTATPTVIE
GNSGSKTVSFTVTRSGNTAIATTINYALDGTATSVSDYNTIKVGTATGTLSGTLKFAVGE
TTKTISLNVLGEKLTEPDETINLNLNYPNQVAAIAPATITIVDDDNIPAISIADKSGSEG
SGNFVFTVKLSNASTEIVTVAYNSSNDTAIAGIDYTAVTGSLTFNPGVTTQTITVPILND
FVAESSERFFVNLINPTNASIADNQAIGTITDNDIVGFNISPATGLITTEAGGTANFNIQ
LTSQPTADVTLNLSSSKVSEGTVSNSVTFTAANWNTPQVITVTGVNDGIVDDNIAYKIIT
GTVVSNDSKYNNFNPANIADIDVVNIKNGNQVNSIITGSAKADNLQGTSSDDLIFGFASN
DIIVGGLGNDQIYGGLGSDNLTGGAGNDIFVLAKGEGIDTIKDFNLSEDLIALSGGLIYS
GLSLTQSGSNTIIKDTSNNQNLAILTGIQASTLNASYFITY
Download sequence
Identical sequences B2J5S4
63737.Npun_F0305 WP_012407116.1.44837 gi|186680837|ref|YP_001864033.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]