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Domain assignment for gi|186683767|ref|YP_001866963.1| from Nostoc punctiforme PCC 73102

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|186683767|ref|YP_001866963.1|
Domain Number 1 Region: 301-497
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.28e-45
Family Ribonuclease PH domain 1-like 0.00000909
Further Details:      
 
Domain Number 2 Region: 4-142
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.33e-42
Family Ribonuclease PH domain 1-like 0.0000291
Further Details:      
 
Domain Number 3 Region: 143-233
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 2.23e-26
Family Ribonuclease PH domain 2-like 0.0013
Further Details:      
 
Domain Number 4 Region: 460-558
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.67e-26
Family Ribonuclease PH domain 2-like 0.00012
Further Details:      
 
Domain Number 5 Region: 565-650
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 3.29e-23
Family Eukaryotic type KH-domain (KH-domain type I) 0.0023
Further Details:      
 
Domain Number 6 Region: 630-713
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.34e-16
Family Cold shock DNA-binding domain-like 0.00061
Further Details:      
 
Domain Number 7 Region: 236-329
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.000000000000243
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|186683767|ref|YP_001866963.1|
Sequence length 718
Comment polynucleotide phosphorylase/polyadenylase [Nostoc punctiforme PCC 73102]
Sequence
MAEVDKSISFDGRDIRLKVGLLAPQAGGSVLIESGDTSVLVTATRSQAREGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKTILTSRLIDRPMRPLFPSWLRDDLQIIALTLSMDE
LVPPDVLAVTGASIATLIAQIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLVVAGS
PHGVIMVEAGANQLPERDIIEAIDFGYEAVRDLIKAQQDLVAELGLVIVQEAPPEVDQTL
ENYIRDRASGQIKKILSQFTFTKPERDAALDVVKDEIATTIKELPEEDPIRVAATANNKA
LGNTFKDITKYFMRRQIIEDNVRVDGRKLDEVRRVSCLVGVLPKRVHGSGLFNRELTQVL
STCTLGTPGDAQNLNDDMQLDQHKRYLHHYNFPPFSVGETKPMRSPGRREIGHGALAERS
LIPVLPSKEQFPYVIRIVSEVLSSNGSTSMGSVCGSTLALMDAGVPILKPVSGAAMGLIK
DGDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKIPGLSLDVISQAVHQAKAAR
LHILEKMLACIDTPRIETSPYAPRLLTIKIDSDMIGLVIGPGGKTIKGITEETGAKIDIE
DDGTVTISAVDENKAKRARNIIQGMTRKLHEGDVYAGRITRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIIKVREIDNKGRINLTRLGIHPDQAAAAREAAAVNR
Download sequence
Identical sequences B2J2V3
gi|186683767|ref|YP_001866963.1| WP_012409992.1.44837 63737.Npun_R3625

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