SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427733957|ref|YP_007053501.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427733957|ref|YP_007053501.1|
Domain Number 1 Region: 34-188
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 5.76e-35
Family Pentapeptide repeats 0.00073
Further Details:      
 
Domain Number 2 Region: 163-285
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 2.09e-29
Family Pentapeptide repeats 0.00047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427733957|ref|YP_007053501.1|
Sequence length 307
Comment putative low-complexity protein [Rivularia sp. PCC 7116]
Sequence
MKKEIKEVAETFSNTSASNQAANQQQQSIREKIINQVLKGENPSSLNLIFTNLKEAKLIG
VNLSNMYLSGVELCSADLTNAQLLGVDLSEADLSNSKLVNAQLAGANLNSIKLIAANLSN
ANLRDANLCTSKLNHACLIGAQLLGANLSGAELTDANLNNALLHKIYLWNANLNNAQLIN
SDLTDAYMNNVKLNNADLTGAILVNAQLSEAKLKNANLKSVNLNSAQLDNANLRNADLSD
ACLEKVNLQNSNLEGAILHNTNFHQAALNNANLTNAKVKNARFSENTGISEDVKIYLKRE
GAIFEDE
Download sequence
Identical sequences K9R6J6
gi|427733957|ref|YP_007053501.1| WP_015116532.1.44015

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]