SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427734093|ref|YP_007053637.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427734093|ref|YP_007053637.1|
Domain Number 1 Region: 98-257
Classification Level Classification E-value
Superfamily alpha/beta knot 3.86e-43
Family SpoU-like RNA 2'-O ribose methyltransferase 0.00044
Further Details:      
 
Domain Number 2 Region: 1-96
Classification Level Classification E-value
Superfamily L30e-like 2.24e-25
Family RNA 2'-O ribose methyltransferase substrate binding domain 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|427734093|ref|YP_007053637.1|
Sequence length 260
Comment rRNA methylase [Rivularia sp. PCC 7116]
Sequence
MLTSLQNPLVKQIRKLHSSKERRKQELFLLEGTHLLEEACATNHPLVSVCCTSGWQASHE
QLWQTIVQKCDRALVVSDDVMKALSTTVQPDGVVATALRNYPMTDIGFSGLQIALETLQD
PGNLGTIIRTAAAASASGLWLSKDSVDLDNPKVLRASAGQWFRLPMQISEDLRQTVLQAK
LAQMQVIATLPAANLTYWQVDWQKPSMILLGNEGAGLSADLAQMADLNVKIPLQPGVESL
NVAITAALILYEAQRQKICA
Download sequence
Identical sequences K9R5A1
gi|427734093|ref|YP_007053637.1| WP_015116668.1.44015

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]