SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427737600|ref|YP_007057144.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427737600|ref|YP_007057144.1|
Domain Number 1 Region: 478-592
Classification Level Classification E-value
Superfamily OmpA-like 6.8e-21
Family OmpA-like 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427737600|ref|YP_007057144.1|
Sequence length 600
Comment outer membrane protein/peptidoglycan-associated (lipo)protein [Rivularia sp. PCC 7116]
Sequence
MSDKNGNRLAEESFNNNHIEGNNGANELSELSELSQLRSLLLGIEEPKLHRFYEKLDNPQ
VDPEDISKMLPEAVVLRTMQDEQLSEALIPTVEQAIQSSIKKDINVLSEAIFPIIGPATR
KAIATALDEMVQSFNYALEHSLSLQSLKWRIEAKQTGKSFAEVVLLRTLIYRVEQVFLID
KNSGLIIQHLVAPKVSAQDPSLVSAMLTAIQDFVKDSFNVTNHEGLDTLEFGELTIWIEQ
GPTSVLAGIIRGNAPEDLRIIFQNAIEKIHLKFGREINNFSGDTKPFEASKPYLEACLEA
HYEAPTRTRYIYAWTSIGILALVLGCWGFFAIRGNKRWDSYVQSLQEQPGIIVTKAEERN
GKYLIAGMRDPLAVEPNTLIKASKLNPKAVVHQWKPFISLERKIAIKRASKLLEKPKTVD
LTLNENGVLQATGSATSQWIKSARNKKPSLSIIGIVEYQDENLKNLDIDQLNAYKKEIEE
TIVLFEQGTTQLIPGEAEKLYKLSSKLQNLIDAGKSLNKQVQFEIAGHTDTEGDETLNIK
LSQNRAQKIFNYLQSQGIDRKNFSTKAFGAQKILRPESTPEDKKINRRVSFKVIIDDVVQ
Download sequence
Identical sequences K9RHM4
gi|427737600|ref|YP_007057144.1| WP_015120159.1.44015

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]