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Domain assignment for AT5G42140.1 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

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Strong hits

Sequence:  AT5G42140.1
Domain Number 1 Region: 228-618
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 7.67e-94
Family Regulator of chromosome condensation RCC1 0.0006
Further Details:      
 
Domain Number 2 Region: 8-118
Classification Level Classification E-value
Superfamily PH domain-like 3.73e-26
Family Pleckstrin-homology domain (PH domain) 0.0029
Further Details:      
 
Domain Number 3 Region: 617-689
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 7.2e-18
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) AT5G42140.1
Sequence length 1073
Sequence
MFTRALLYVLQALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLAT
VSKIVPGQRTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALISG
QAGRSKIDGWSDGGLSIADSRDLTLSSPTNSSVCASRDFNIADSPYNSTNFPRTSRTENS
VSSERSHVASDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCE
NVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEAS
GGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGH
GTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVF
YPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKE
PRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVE
DKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHV
KNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSKKSL
KAALAPNPGKPYRVCDSCHSKLSKVSEANIDSRKNVMPRLSGENKDRLDKTEIRLAKSGI
PSNIDLIKQLDNRAARQGKKADTFSLVRTSQTPLTQLKDALTNVADLRRGPPKPAVTPSS
SRPVSPFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTNELLNQEVVRLRAQAESLRHR
CEVQEFEVQKSVKKVQEAMSLAAEESAKSEAAKEVIKSLTAQVKDIAALLPPGAYEAETT
RTANLLNGFEQNGFHFTNANGQRQSRSDSMSDTSLASPLAMPARSMNGLWRNSQSPRNTD
ASMGELLSEGVRISNGFSEDGRNSRSSAASASNASQVEAEWIEQYEPGVYITLLALGDGT
RDLKRVRFSRRRFREQQAETWWSENRERVYEKYNIRGTDRSSVATSPISQSQF
Download sequence
Identical sequences Q9FHX1
AT5G42140.1 AT5G42140.1 3702.AT5G42140.1-P

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