SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Aquca_001_00872.3|PACid:22043111 from Aquilegia coerulea v195

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Aquca_001_00872.3|PACid:22043111
Domain Number 1 Region: 97-263
Classification Level Classification E-value
Superfamily Pseudouridine synthase 4.56e-27
Family Pseudouridine synthase RsuA/RluD 0.0023
Further Details:      
 
Weak hits

Sequence:  Aquca_001_00872.3|PACid:22043111
Domain Number - Region: 57-86
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.0012
Family Pseudouridine synthase RsuA N-terminal domain 0.083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Aquca_001_00872.3|PACid:22043111
Sequence length 284
Sequence
MGSAEGSGIGGKQFGVAWPDFNDGLTYTDNVQDSSISLIEFYSTNHNNSAPLQGWLQRIQ
NGQITVDGQVVKDPQTILRSGSQLVYHRLPWKEPDAPYLLQVLFEDDHLVAVNKPSGLQV
LPGGLFQQRTVLTQLQWRVAADYGQPQPSPVHRLGRGTSGILLCAKTKLAKVCLASYFAH
GTSIVGDKRTISLEVNATRKISKIYRALVTGIIKEHQVVIEQPIGMIRYPGVAHGLYVAS
SSGKPAMSRVNVLERNIQANQSLVQHGYFIFDTVYPNRRFRHGP
Download sequence
Identical sequences A0A2G5FCF0
Aquca_001_00872.3|PACid:22043111

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]