SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Aquca_110_00050.1|PACid:22033450 from Aquilegia coerulea v195

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Aquca_110_00050.1|PACid:22033450
Domain Number 1 Region: 23-108
Classification Level Classification E-value
Superfamily F-box domain 0.0000000000000051
Family F-box domain 0.0046
Further Details:      
 
Weak hits

Sequence:  Aquca_110_00050.1|PACid:22033450
Domain Number - Region: 125-349
Classification Level Classification E-value
Superfamily RNI-like 0.000247
Family Cyclin A/CDK2-associated p19, Skp2 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Aquca_110_00050.1|PACid:22033450
Sequence length 413
Sequence
MKKRGKRRKRKRKKKKKSDVGVVDRISALPDEILHNIFSFIDMTTIVTTSILSKRWRHLW
TSTPYLSFNSRQLYFQSKNADGYDYMRFKQFVDNVFLRRENSSIIYKFEVYLVGPLFSSC
FLNTWLVKSLESHVQIFDLEVHQYDHDEAARLELPDCLFTSEVKTLTLDGLFVIPNTMGS
AANITSLHLLAVILPDGNRNGELILSLPVLDNLKMHWCRYNHLNCLTIKCSLLKRFEMIS
ASSEPFGSGILKIHCPNLTWINLTLCLGFIFKVCCLENLSALSNAHIAVSKEDEIHAQHL
MEIIKGISNVNALTLSPPLVKCSYHSTEEVQHWEEDEFKICRLKTVEIQNFCGIEEEFKV
VELILKTAICLKEVMIVTKEFTEEQLPEIEQKLSALPHASSSVSIRTLRNLHL
Download sequence
Identical sequences A0A2G5C312
Aquca_110_00050.1|PACid:22033450

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]