SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for HMPREF0012_03516T0 from Acinetobacter calcoaceticus ruh2202

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  HMPREF0012_03516T0
Domain Number 1 Region: 49-90,129-212
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 0.0000000919
Family Phosphate binding protein-like 0.072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) HMPREF0012_03516T0
Sequence length 334
Comment | HMPREF0012_03516 | Acinetobacter calcoaceticus RUH2202 conserved hypothetical protein (335 aa)
Sequence
MKKKLGIISAVFSCAMGTAHAGQNVCVFDLLGKSGESYKLMEEWALAAKDWQADITLIPF
QDEALVDRRLREGKCDAAYMTSMRARNYNKFAGSIDAIGGVTSNAIAQKAISYVLDKRNK
HRMVTAQNGTNYEVVGIVQIGLAYLFVRDKNLNSIEKVRGKKFAILHYDLAQKIMVESVG
AQPIPSEINDFVKKFNSGQVDAIAAPAYAYKPLEIGKGIGTKGAMFNFPVVNVTGDLIAR
TDKFPTDFGIKSRDWFIQKLPQNFAMIKRLEMGVPSKIRTNFSAEDKTKYQKLLREGRLN
LTKQGVYDATMMSVLKRARCTVERTNFECTLNGE
Download sequence
Identical sequences D0S7V5
WP_003656043.1.78621 HMPREF0012_03516T0

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]