SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os06g41960.1|PACid:21931464 from Oryza sativa v193

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os06g41960.1|PACid:21931464
Domain Number 1 Region: 312-605
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.01e-53
Family Protein kinases, catalytic subunit 0.00043
Further Details:      
 
Domain Number 2 Region: 184-219
Classification Level Classification E-value
Superfamily LysM domain 0.0000458
Family LysM domain 0.0055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os06g41960.1|PACid:21931464
Sequence length 630
Sequence
MPPGARARRIAALDLIFLVFLRLASAYQRPSDAHINCIDSFCLGGYTCSETTATTSCTAY
LTFRSDPPLSVAYLLNATPSAVAAANSVPLAVSPVDGTQLLLVPVPCSCNRATGYYQHNT
TYAIQELDTFFLIANNTFQGLTTYQSIIANNPASEAMSPVINGPLAVPLRCACPSATTGR
INNLLTYVVQEGDNVTSIARRFNSTHGDVLAANTLLVPLVHPPHSRVVLANTTITSTTPP
ESQKFYVSSPCSNGLLAGLGIGVGCGVSAWAAVLAVFLLWRRRRRRPVGDSSGMARETPL
VAAVRGAVETLAAYSYADIETATAGFAEERRVAAGSSVYRAVINGEAFAVKRVAAGGDDV
RGEVDVLGRVNHSGLVRLRGLCANGDDTYLVLEFAENGALSEWLHPGSAAACLRRVLGWK
QRVLVALDVAGGLNYLHHFTNPPYVHKNLNSGNVLLDANLRAKVSSLGFARAVAVAVAAG
DDSIALMTHHVVGTHGYLAPEYLEHGLISPKLDVFSFGVIQLELLSGKTAAFVTDDDGQN
MLLWQAADGLVDGDGAWFKLRAFMDPQLQGHYPIGVASAVAALAVRCVAREPRARPSMEE
VFVTLSAVYNLTVDWDPQNYSASASMVLGR
Download sequence
Identical sequences A0A0E0Q0B7 Q69TY8
LOC_Os06g41960.1|PACid:21931464 LOC_Os06g41960.1|13106.m04386|protein 39947.LOC_Os06g41960.1 XP_015642396.1.37577

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]