SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os09g32860.2|PACid:21925209 from Oryza sativa v193

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os09g32860.2|PACid:21925209
Domain Number 1 Region: 70-289
Classification Level Classification E-value
Superfamily L domain-like 0.0000000214
Family Polygalacturonase inhibiting protein PGIP 0.087
Further Details:      
 
Weak hits

Sequence:  LOC_Os09g32860.2|PACid:21925209
Domain Number - Region: 2-31
Classification Level Classification E-value
Superfamily F-box domain 0.0128
Family F-box domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os09g32860.2|PACid:21925209
Sequence length 356
Sequence
MSFKDAARAACVSRAFRHSWRCHPNLICCIGILGSDFINKFDRIMKNHSGIGIKSVKFQY
NSFYNTRRSTSISHHFDSWHQIAITPWIEELTISLSLSSFNMEYSFPCSLLADGRASSMR
HLYLGNCGFHPTINLDLRNLTRLHLINCLSHLEVFDCRIQVVENKAPNLCSFDFGGRQMV
DTPILPSKFLHLKCLTIDHTIISSSPAYNYLYLVYFLDACPSLETFLLGISQNHMEHDSI
IGDSSHMRQMPGHRHDNLRSVEITGFYSAKSLIELTCYILDNTVALKYLTLDTTRGFFSC
STGEHDRCFPMDKIMITEAKRAVLAIQTYIERKVPSTVKLNVVKPCSRCHAVESYL
Download sequence
Identical sequences B9G4G4
LOC_Os09g32860.2|13109.m03288|protein LOC_Os09g32860.2|PACid:21925209

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]