SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for LOC_Os12g01290.1|PACid:21934332 from Oryza sativa v193

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  LOC_Os12g01290.1|PACid:21934332
Domain Number 1 Region: 539-753
Classification Level Classification E-value
Superfamily Cysteine proteinases 3.14e-29
Family Adenain-like 0.00054
Further Details:      
 
Domain Number 2 Region: 275-384
Classification Level Classification E-value
Superfamily Ribosome inactivating proteins (RIP) 0.000000000000144
Family Shiga toxin, A-chain 0.062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os12g01290.1|PACid:21934332
Sequence length 764
Sequence
MAPRKGRPPRAMRKVAPVVHHAWKRVGAADREGTTERRSTSWLPTRRGGLLPRHRRRCRR
TFSSPSLHHRPSPDPLASSPLASQPAQRGETGTAESKEETGAASPIKNAIKNAAAGEMAE
EEKLAGAAPGRNGDGHQERGGGWRDGGGGNGGDGDHKNSRGSRNTKKEKGKKLVKEAIKK
HQEARKAKEIGGARGRKESKAMDDGAAALRRKAREITKEEEDDERLRGEMVSRVRARIRK
QQPDEAHETYLLHDAGRGAGDTSDHPAAIARPQDVTTFHIVGVVDTDGARVRLLFRDSDL
YFVAFKTGSCWFRFNDEHIPTFLTPTVPIAYTSGYMNIAQVRVGYHCLYDIFNVISRYTP
ESAQEKTNERQRILQCAALMLSESQSTLIVLFNPDQNKYENYKIVGRRKLLSRAAAAAAE
AAARAAEAAARPSQAAAAEAEEEEEDDDDDEDEYPWQCQTRAGQELLILLYDKRLLPSSS
DNVEDLPTVSAPPVTPMVVTQQKNHKKTQAEEVDEKKNQENPNTDATIGAPSGGENHQNR
SLISCDGINLYESDLDSLRGPHWVTDAILGYALAKFSRAYSDDGLLLVQPTNAALLNNKH
YVAAEADHLLLASRRLVLIPVNDNLDFNQAGDGKHWSLLVIHKTSNDGVIQFIHHDSVRS
GDNSYNLHAAQKLANVLRGVLPTAGDVINAETPQQTNGNDCAIHVLAAVQVICRWWRANA
NKSGPADWIRKLDKRISEGNITQMRASLLQDIERDCQKKKSKDQ
Download sequence
Identical sequences LOC_Os12g01290.1|PACid:21934332 LOC_Os12g01290.1|13112.m00038|protein 39947.LOC_Os12g01290.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]