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Domain assignment for LOC_Os07g17230.1|PACid:21901745 from Oryza sativa v193

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOC_Os07g17230.1|PACid:21901745
Domain Number 1 Region: 546-798
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.03e-37
Family G proteins 0.055
Further Details:      
 
Domain Number 2 Region: 861-1084,1124-1265
Classification Level Classification E-value
Superfamily L domain-like 1.87e-32
Family Internalin LRR domain 0.072
Further Details:      
 
Domain Number 3 Region: 350-533
Classification Level Classification E-value
Superfamily RNI-like 2.82e-29
Family Cyclin A/CDK2-associated p19, Skp2 0.016
Further Details:      
 
Domain Number 4 Region: 71-160
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.84e-21
Family B3 DNA binding domain 0.0003
Further Details:      
 
Weak hits

Sequence:  LOC_Os07g17230.1|PACid:21901745
Domain Number - Region: 1271-1335
Classification Level Classification E-value
Superfamily L domain-like 0.085
Family Rab geranylgeranyltransferase alpha-subunit, C-terminal domain 0.073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOC_Os07g17230.1|PACid:21901745
Sequence length 1357
Sequence
MEPGSSSREGEQQEPANERLTATGGGGGGGGGSPVSDQELSDGEEVSDGEYQAGDDFSGY
AVRGRGFVEKEHIFDKVVTPSDVGNLGRLVIPWQHAECYFPRDVPANEREGVVLRFEDDA
GNSWRFLYRGSSLTLGWSHFFRKNRLDAGDMVSFYRGASEATRDRLFIHSKRRMHILPTL
GYSDPQVHINRLFQLLVRVRTMVSSFGKSGSPSPPNSPLPTVQNFTYKALKDCLQDLHYY
SLLSMMGRNHKSQSTSAKIRDTIPTLDALIQLRSLSDPVFRIPAAATSHCILLCRGVLGI
MGFLCSDENMKEDHRMLQVPAFDDLNYSAQDKITRMKEQTMPSSLADPIYLLPTAIRNLL
YLDLSNCSDIVQLPPSLGSSLHMLSALNLSCCYSLRALPDSLVCLYDLQILLLSFCHNLQ
NLPVSFGDLSNLRLLDLSGCRSLRLFPSSFVNLGSLENLNLSDCIRLMGIPQNFEDLQKL
EYLNFAGCYRVDLPVYCLTNLVNLKCLTLSNHTDIKDFPYSFTDLKRHLYLSRWWKYNWV
HTQCNLKSYRCHQQRIINSLLSDGSDEGDITSEQSLTSICIFGERGTGKTELLHEIYNDQ
KILEGFHLRIWINMCDKKRLLEKIIEFTACAYCYDAPSSILEETVREELNGKRFLLVLND
ADIENQCFWTDVWKVSNVGAAGSALIVTTRSKEVASLFGAMKPYYMNPLSKEECFMVFQE
HADCGFDINNDHELTKVGWKIVEKCGGNLLCMKALSGLLWHSKTALSEIDSLVGGIVPAL
RLCYDLLPSHLKQCFKFCSLFPKDYVFVKHHIIQLWISQGFVYPEEDSQPEDTGLQYFNE
FLCRSFFQHCPFSNDHEDKFVMHELFHDLARSVSKDESFSSEEPFFSLPENICHLSLVIS
DSNTVVLTKEHRHLQSLMVVRRSATEYSSSFVPLLKILGLNDLLMKCGFLRALNLSCTTI
VDLPGSIGRMKHLRFLAMNNTKIKSLPTEIGQLNTLQTLELKDCCCLIELPESTKNLMKL
RHLDVQKEPGNIHVGMPSGLGQLTDLQTLTVFNIGDDLSHCSIRDLKNLSGLRGHVHITG
LQNITAGDDAKEANLVGKQFLQALTLEWCCSSEEMEDESDKEIANQVLQNLQPNTSIQEL
AIQNYPGNSFPNWIKDSGLCMLVSITIDNSQDCNEIPYLGDLPCLKFLFIQKMYAVENFG
QRSNSLTTDGKHAPGFPSLEILNLWEMYSLQFWNGTRYGDFPQLRGLSISRCPKLSNLPP
LISLLYLSFHCGDQLPALSEFPSLKSLKIEGFQKLKSVSFCPEMPLLQKLEISDCKELVS
IDAPLLSVSNLKVVRCPKLHFGGSWLEGCLMWEEFKR
Download sequence
Identical sequences 39947.LOC_Os07g17230.1 LOC_Os07g17230.1|13107.m01806|protein LOC_Os07g17230.1|PACid:21901745

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