SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSADVT00029238001 from Adineta vaga

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSADVT00029238001
Domain Number 1 Region: 103-369
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.76e-48
Family G proteins 0.0000247
Further Details:      
 
Domain Number 2 Region: 552-683
Classification Level Classification E-value
Superfamily Translation proteins 1.16e-27
Family Elongation factors 0.0017
Further Details:      
 
Domain Number 3 Region: 434-547
Classification Level Classification E-value
Superfamily Initiation factor IF2/eIF5b, domain 3 1.31e-23
Family Initiation factor IF2/eIF5b, domain 3 0.00036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GSADVT00029238001
Sequence length 684
Comment pep supercontig:AMS_PRJEB1171_v1:HG380882:173117:175763:-1 gene:GSADVG00029238001 transcript:GSADVT00029238001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLYEDHRKKDTIASDTLLTSAMIPIVSENDDMIEKGYSSTDSWADDCEEDNTKIEVKSGL
TAEHENQKEEDEDENDLGLTSLERVRRRLERYHDICESHRTIENLRAPVICVLGHVDAGK
TTILDNLRRTHVQDDEAGGITQQIGATNVPLETILERIKMCLSIIDTPGHAIFDNLRARG
SSLCDLAILVVDIMKGIQPQTIESIRLLTEKQTPFIIALNKIDLLYDWKGDRKQNVEYVL
EKQNQNTQYQFEKRCNYIIGQFAEQCLNVALYNKNPDSNEYYSMVPTSARSGDGMGSLIA
MIIEKCQTTLAKHIAYSEEVQATVLEVKTIRGFGTTLDVVLIDGCLCRGDKIIIAGQEGP
ITTQIRVLLVPELNQDIRMTTQYKDQEKVTGACSIKIVAKDLEKSLAGLPLFVIRKQDEI
DYYTVEIQRMITDMLNLIQLEESGVYVQTSTFGSLEAFLKLLKTHHIPCAGVNIGPVHRK
DIMRASTQLEKDKQWACLLVFDVKIEPTAQEYAKTLGLRILQSDGVYNLCDMFLAYQEEK
FKEKQEKHRHLVVYPCKLRILWNHVYNTSNPIICGVRVEDGFVKIGTPICVPSKDNIDLG
RIVGIKKNDTSVEIAEKGSEVSIKIEAINREELKMYGRHFDHNDLLISKISRESIDILKA
YFRQDMKSDYWKLVIELKKLFHIV
Download sequence
Identical sequences GSADVT00029238001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]