SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSADVT00051596001 from Adineta vaga

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSADVT00051596001
Domain Number 1 Region: 44-288
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.36e-86
Family ABC transporter ATPase domain-like 0.00000111
Further Details:      
 
Domain Number 2 Region: 348-596
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 1.06e-34
Family ABC transporter transmembrane region 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) GSADVT00051596001
Sequence length 599
Comment pep supercontig:AMS_PRJEB1171_v1:HG381125:56269:58576:1 gene:GSADVG00051596001 transcript:GSADVT00051596001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQLKKSSIERSIISFDFSSIQGHDPNINEKEILAEDLLDEESIPDIIGDIQFDNVNLAYI
SRKDVTVLKNLNFIARSNQRTALVGSSGSGKSTCMSLLLRLYEPSSGRITIDGRPITDFT
IKQLRKSIGVVSQEPILFGMSIYENIRLGKLNATRKEIEEAAREANAHNFIMKLPDKYET
LVGERGIQMSGGEKQRIALARALVKQPSILLLDEATSALDNVSEKIVQEALDRACKNRTT
IVIAHRLSTIQNADQIYVLDRGSVIEEGKHEILMTKEEGKYQTMVKKQQMQGMTEDNDYD
DDRIIMERISEQDDPQMAERNRLLSEGELVDMDKVQIKSRIKSISPKKQSIFLRLLSMNS
SEWLTIVIACVACLIAGICQPLFAILLAEIIHSFKGCHLSNIRQRVLYSSLVFFFLGVFL
LIIRFLESTAFAIAGSKLIKRIRAKAFACLLRQEVAYFDRPENSSGTIGARLSSGAAAIQ
DVAGVRLGVICEAFALTGFGVLFGLLFNVQLTVIIFLPMILLTVFGLIHIYSCKSLMDRL
NIMQGEASALAADVLQNMRTVKQLSAEKEMLRRYSEIIHKALASVLSVILTYIYLFSFK
Download sequence
Identical sequences GSADVT00051596001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]