SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSADVT00054496001 from Adineta vaga

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSADVT00054496001
Domain Number 1 Region: 57-182
Classification Level Classification E-value
Superfamily N-terminal domain of cbl (N-cbl) 4.97e-41
Family N-terminal domain of cbl (N-cbl) 0.0000115
Further Details:      
 
Domain Number 2 Region: 270-356
Classification Level Classification E-value
Superfamily SH2 domain 5.24e-39
Family SH2 domain 0.0000185
Further Details:      
 
Domain Number 3 Region: 184-269
Classification Level Classification E-value
Superfamily EF-hand 1.41e-31
Family EF-hand modules in multidomain proteins 0.0001
Further Details:      
 
Domain Number 4 Region: 364-444
Classification Level Classification E-value
Superfamily RING/U-box 3.31e-30
Family RING finger domain, C3HC4 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GSADVT00054496001
Sequence length 587
Comment pep supercontig:AMS_PRJEB1171_v1:HG381174:96757:98873:-1 gene:GSADVG00054496001 transcript:GSADVT00054496001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAQAAASNLRRRILGSRQDSPSVLPTQSTITTDLPSTVNMTLNPILPTIQHRSITRIDRR
SIEKVWKQMDRIVKYCQMPKMNLKNSPPYMLDILPDLYQTLREILNNYDDRLHILNDIEY
FRIFIDNLIEQCTKTIDCFKRAGHHMYDEQSTHRKYLTKLSLYFSHNLAELKSLFNRGIY
EGEKFRLTKQEATDFWKSNFNERTIVPWEEFKEKLNRIHPIHTINETTALQNTIDLTNNN
HVSIFEFDVFTRLFHPWSSLLTNWKLLAVTHPGFMAFMTYDEVKAILTDYIDKPGSYVFR
LSCTRLGQWAIGYVTTQNTILQTIPQTKPLIQSLIDGEREGYYKYPNGKNIHIDLSSALR
PTESDRILVSEEQYAIYCDMGTCFELCKICSVNNKDCKIQPCGHLICQSCLIAWQNQNSA
KPPPLCPFCRGEIKGFESVVISPFDSAATANKKESSPNGSNEFDDQTLDANPDVQTLQSL
ATARPIYNETTQQTNGTSIISDNTSSTPPPIPPRPVNIKTNGTRVSNDVIPKGTLQQRFQ
QFSSPVIPPPLHNNDVLLLPQRSFAKTQRPLSSASSSESLNDSLGKI
Download sequence
Identical sequences GSADVT00054496001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]