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Domain assignment for EG:BRADI1G00517.4 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI1G00517.4
Domain Number 1 Region: 170-256,343-414
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 5.68e-38
Family Canonical RBD 0.0035
Further Details:      
 
Domain Number 2 Region: 244-333
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000000217
Family Canonical RBD 0.0071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G00517.4   Gene: BRADI1G00517   Transcript: BRADI1G00517.4
Sequence length 586
Comment pep:novel chromosome:Brachy1.0:1:426399:430780:-1 gene:BRADI1G00517 transcript:BRADI1G00517.4
Sequence
MAGSTIEQKAGQQSEPDMLSATINPVQHQVDGGEADDMVVKDAPPAQETQAYKQEVAVAD
MNEEAAENKTAEVKESEVEGGGAKDMVTDVDAQSATVAAYEQGNEGEVDAEQEEEDPEEV
VFEEDEEPVSEGQAAAQDTGEKDRARVEEHERMVMSDMAKNRQLKKELEIFVGGLNRDAV
EEDIRSVFGQVGDVVDVRLHKDLLTNRNKGFAFVKFATKEQVSRALAEMKNPMIRGKRCG
IAASEDNDTLFLGNICNTWTKEAIKKRLLDYGIEGVQSLTLVPDTQNEGQSRGFAFLEFS
CHADAMLAFKRLQQPDAMFGHPERTAKVAFAEPIKEPDAEVMAQVKSVFIDGLPPYWDED
RVKDRFKAYGVIERVVLASNMSSAKRNDFGFVNFSTHEAALACIEATNNTELGDDGKSKV
KVRVRLSNPLPKSQAVKGGMTGGFRIGYSGFGFNRPGRGFSKGRSAPRRAGFHGGRGFSN
HAFARGGRFNYAANNNSFEASPSNFQGRQGSGFRGGRWQPSSVRHGSFNSGLGRGYPPSR
RPSFEPEGDFGGPFDENPYYYADVGPCVKRPYSLMVCNNICYYVKW
Download sequence
Identical sequences I1GKH5
EG:BRADI1G00517.4

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