SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G09300.3 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI1G09300.3
Domain Number 1 Region: 41-505
Classification Level Classification E-value
Superfamily PLP-dependent transferases 8.56e-185
Family GABA-aminotransferase-like 0.0000000000775
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G09300.3   Gene: BRADI1G09300   Transcript: BRADI1G09300.3
Sequence length 514
Comment pep:novel chromosome:Brachy1.0:1:6675454:6679951:-1 gene:BRADI1G09300 transcript:BRADI1G09300.3
Sequence
MAMATALRKLSSNALRGQPLSRLTPLYSMASLPATEERSGVTWPKQLNAPLEEVDPEIAD
IIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESL
CQKRALEAFNLDPEKWGVNVQPLSGSPANFHVYTALLKPHDRIMALDLPHGGHLSHGYQT
DTKKISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPKLIVAGASAYARLYDYDRMR
KVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKG
TNKQGKEIMYDFEDKINAAVFPGLQGGPHNHTITGLAVALKQATTQEYRAYQEQVMSNCA
RFAQSLTSKGYDIVSGGTDNHLVLVNLKNKGIDGSRVEKVLENVHIAANKNTVPGDVSAM
VPGGIRMGTPALTSRGFVEEDFAKVADFFDSAVNLALKVKAATTGGTKLKDFVATLQSDS
SIQAEIAKLRHDVEEYAKQFPTIGFEKETMKYKN
Download sequence
Identical sequences I1GNI8
15368.BRADI1G09300.3 EG:BRADI1G09300.2 EG:BRADI1G09300.3 XP_003559966.1.954

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]