SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G11430.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI1G11430.1
Domain Number 1 Region: 369-629
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 8.06e-56
Family Protein kinases, catalytic subunit 0.00046
Further Details:      
 
Domain Number 2 Region: 45-202
Classification Level Classification E-value
Superfamily L domain-like 3.61e-33
Family Polygalacturonase inhibiting protein PGIP 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G11430.1   Gene: BRADI1G11430   Transcript: BRADI1G11430.1
Sequence length 671
Comment pep:novel chromosome:Brachy1.0:1:8486874:8490027:-1 gene:BRADI1G11430 transcript:BRADI1G11430.1
Sequence
MARLVLALSLLSAWGAEADLADDARALLAFRAAVGRHLAWNATDLGSACSWTGVTCDGGR
VAMLRLPGRALAGDVPAGSLGNLTALHTLSLRFNALSGSLPADLASATALQNVILNGNKL
SGDFPPAILALPGLVRLALDGNDLSGPIPPALANLTRLKVLLLNNNRFVGQIPELTAQLQ
QFNVSFNQLNGSIPSSLRSKPREAFLGMTGLCGGPLGPCPGEASPSPAPAVKPSSPTTPA
TDGENSPNGGENGEKNKKLSGGAIAGIAIGSVLGAALLLFLLICLCRRSGRTKTPALQMP
PPSPTSALVAGSRKPPEVTSGAAVAPMNTVGHPQVSLGQSTSGKKLVFFGSAANVAPFDL
EDLLRASAEVLGKGAIGTTYKAVLESGATVAVKRLKDVTMSEPEFRDRIADIGELQHEFI
VPLRAYYYSKDEKLLVYDFMPMGSLSALLHGNRGSGRTPLNWAIRSSIALAAARGLEFIH
STSSSTSHGNIKSSNILLAKSYQARVTDNGLATLVGPSSTPSRTTGYRAPEVTDPRRVSQ
KADVYSFGVLLLELLTGKAPSQAALNDEGVDLPRWVQSVVRSEWTAEVFDMELLRHQNVE
EQMVQLLQLAIDCVAQVPDARPTMSHIVVRIDEIKKASEIAEGIDQQQNALNLADGEYQA
ESVDGPAHFAP
Download sequence
Identical sequences I1GP81
EG:BRADI1G11430.1 15368.BRADI1G11430.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]