SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G49770.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI1G49770.1
Domain Number 1 Region: 79-414
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.38e-62
Family Extended AAA-ATPase domain 0.000000059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G49770.1   Gene: BRADI1G49770   Transcript: BRADI1G49770.1
Sequence length 417
Comment pep:novel chromosome:Brachy1.0:1:48423113:48424700:1 gene:BRADI1G49770 transcript:BRADI1G49770.1
Sequence
MAPPPLFSPASAPAASPALFSASTSRPLFVTAASAVSARTPSSRRRWGSRRRLTVRNVAA
PEASTATKAAGGAKESQRPVYPFPAIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGTGKST
TVRSLVDLLPDISVVVGDPFNSDPYDPEVMGPEVRDRVLKGDSLPVTTAKITMVDLPLGA
TEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWN
TVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERAR
FDRDPKSFRQSYLEEQEKLQEQITSARGNLGSVQLDHDLRVKISKVCAELNVDGLRGDIV
TNRAAKALAALKGRDTVTVEDIATVIPNCLRHRLRKDPLESIDSGLLVIEKFYEVFS
Download sequence
Identical sequences I1H168
15368.BRADI1G49770.1 XP_003557120.1.954 EG:BRADI1G49770.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]