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Domain assignment for EG:BRADI1G58460.2 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI1G58460.2
Domain Number 1 Region: 318-702
Classification Level Classification E-value
Superfamily RNI-like 1.18e-69
Family Cyclin A/CDK2-associated p19, Skp2 0.048
Further Details:      
 
Domain Number 2 Region: 74-405
Classification Level Classification E-value
Superfamily L domain-like 2.48e-63
Family Polygalacturonase inhibiting protein PGIP 0.018
Further Details:      
 
Domain Number 3 Region: 784-982
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.16e-57
Family Protein kinases, catalytic subunit 0.0004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G58460.2   Gene: BRADI1G58460   Transcript: BRADI1G58460.2
Sequence length 986
Comment pep:novel chromosome:Brachy1.0:1:57297123:57301471:-1 gene:BRADI1G58460 transcript:BRADI1G58460.2
Sequence
MARFLLPLLLFAAAACSAVSASEEEPAAAALREFKRALADIDGRLSSWDNSTGRGPCEWA
GIACSSSGEVTGVKLHGLNLSGSLSASAAAAICASLPRLAVLNVSKNALSGPIPATLSAC
HALQVLDLSTNSLSGAIPPQLCSSLPSLRRLFLSENLLSGEIPAAIGGLAALEELVIYSN
NLTGAIPPSIRLLQRLRVVRAGLNDLSGPIPVEITECAALEVLGLAQNALAGPLPPQLSR
FKNLTTLILWQNALTGEIPPELGSCTSLEMLALNDNGFTGGVPRELGALSMLVKLYIYRN
QLDGTIPKELGSLQSAVEIDLSENRLVGVIPGELGRISTLQLLHLFENRLQGSIPPELAQ
LSVIRRIDLSINNLTGKIPVEFQKLTCLEYLQLFNNQIHGVIPPLLGARSNLSVLDLSDN
RLKGRIPRHLCRYQKLIFLSLGSNRLIGNIPPGVKACMTLTQLRLGGNKLTGSLPVELSL
LQNLSSLEMNRNRFSGPIPPEIGKFKSMERLILAENYFVGQIPASIGNLAELVAFNVSSN
QLAGPVPRELARCSKLQRLDLSRNSFTGIIPQELGTLVNLEQLKLSDNNLTGTIPSSFGG
LSRLTELQMGGNLLSGQVPVELGKLNALQIALNISHNMLSGEIPTQLGNLRMLEYLYLNN
NELEGKVPSSFGELSSLMECNLSYNNLVGPLPDTMLFEHLDSTNFLGNDGLCGIKGKACP
ASLKSSYASREAAAQKRFLREKVISIVSITVILVSLVLIAVVCWLLKSKIPEIVSNEERK
TGFSGPHYFLKERITYQELLKATEGFSEGAVIGRGACGIVYKAVMPDGRRIAVKKLKCQG
EGSSVDRSFRAEITTLGNVRHRNIVKLYGFCSNQDSNLILYEYMENGSLGEFLHGKDAYL
LDWDTRYRIAFGAAEGLRYLHSDCKPKVIHRDIKSNNILLDEMMEAHVGDFGLAKIIDIS
NSRTMSAVAGSYGYIAPGSINYDLFC
Download sequence
Identical sequences I1H430
EG:BRADI1G58460.2

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