SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G71780.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI1G71780.1
Domain Number 1 Region: 10-174
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.27e-56
Family G proteins 0.000000399
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G71780.1   Gene: BRADI1G71780   Transcript: BRADI1G71780.1
Sequence length 215
Comment pep:novel chromosome:Brachy1.0:1:69705475:69707717:-1 gene:BRADI1G71780 transcript:BRADI1G71780.1
Sequence
MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTIR
LQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVTDRQSFLHTSTWIDEVKTERAGTDVLIV
LVGNKTDLVDKRQVPTDEGEAKAQEHGVMFIETSAKAGFNVKPLFRKIATSLPGMDALSS
AKQEDMVDINLRPASGSKAPGAAAQQEQKAGGCSC
Download sequence
Identical sequences I1H8Q8
EG:BRADI1G71780.1 XP_014754044.1.954 15368.BRADI1G71780.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]