SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G72237.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  EG:BRADI1G72237.1
Domain Number - Region: 47-180
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 0.0489
Family NRPS condensation domain (amide synthase) 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G72237.1   Gene: BRADI1G72237   Transcript: BRADI1G72237.1
Sequence length 436
Comment pep:novel chromosome:Brachy1.0:1:70022982:70024365:-1 gene:BRADI1G72237 transcript:BRADI1G72237.1
Sequence
MEITSSAMLRPAYSVPHRLSGEKVPLTVFDRASLDIFVPSMLAYPAPAPSNGALKDGLRR
AVAAYPHLAGRLALDLRGRRYIHVNDEGVLLIEAAVGVYLADVLVDGRMDARVDDLYPAI
PVENIGAALLQIKLNRYRCGGLVVGISSHHHAAAGHSMGLFFTTWASAVREGKDFIAPTP
FLDRATTAVPRSTPKPVFDHRSVEFTDACFGKSYAVVPMDRIRNFTVHFTADFIANLKAR
VGVGVDVRCSTFQCLLAHVWKKITAARDLNPEGFTKVRVAVNCRSRANPPVPMDFCGNMV
LWAFPRLQVRELLNWSHGSVVGAIRDAVARIDDEYIQSFVDYGAVADAGGEELVATAADA
GTMFCPDLEVDSWLGFRFHELDFGTGAPSAFVPPDLPIEGLMIFVPSRMAKGGVDLFMAI
AEEHVASFEQICYSLD
Download sequence
Identical sequences I1H8W1
EG:BRADI1G72237.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]