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Domain assignment for EG:BRADI1G74850.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI1G74850.1
Domain Number 1 Region: 217-399
Classification Level Classification E-value
Superfamily Pseudouridine synthase 3.04e-33
Family Pseudouridine synthase RsuA/RluD 0.0003
Further Details:      
 
Domain Number 2 Region: 154-240
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 1.18e-17
Family Ribosomal protein S4 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G74850.1   Gene: BRADI1G74850   Transcript: BRADI1G74850.1
Sequence length 405
Comment pep:novel chromosome:Brachy1.0:1:71915256:71919350:-1 gene:BRADI1G74850 transcript:BRADI1G74850.1
Sequence
MALAAAAAAVTSIHPFLSRPTRVLRLPPLLLRASSSTSTSDFNITFAEPAPSKKASGPGP
SAQPLVPWIARGADGKPCLHTTPPPDVLQAVAAAEAEAKRAKRDASRSQKGAGAVTDAPV
ASVKAKEKKAAPTGPPKFSKAARRFYNENIREHEPQRLAKVLAAAGVASRRTSEELIFQG
KVTVNGSVCTSPQTKVDISKDSIYVNGNRISKKLPPKLYFAVNKPKGYICSSGEESKSVI
SLLDDYLKGWNKIQPGIPKPRLFTVGRLDVATTGLIIVTNDGEFAQKVAHPSSNITKEYV
VTIDGAVHKKHLVAISEGTKVDGVKVVPDLVEPLDAQPDAKRTRLRIVVHEGRNHEVREL
VQNAGLKVYALKRVRIGRFRLPADLGIGKMVELKEADIKSLEGNT
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Identical sequences I1H9M1
15368.BRADI1G74850.1 EG:BRADI1G74850.1 XP_014751761.1.954

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