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Domain assignment for EG:BRADI2G05430.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI2G05430.1
Domain Number 1 Region: 244-444
Classification Level Classification E-value
Superfamily PH domain-like 4.67e-58
Family SSRP1-like 0.0000232
Further Details:      
 
Domain Number 2 Region: 546-626
Classification Level Classification E-value
Superfamily HMG-box 4.84e-24
Family HMG-box 0.0002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G05430.1   Gene: BRADI2G05430   Transcript: BRADI2G05430.1
Sequence length 641
Comment pep:novel chromosome:Brachy1.0:2:3922293:3928913:1 gene:BRADI2G05430 transcript:BRADI2G05430.1
Sequence
MSDGHLFNNILLGGRGGTILEEMFAVAANSFSTAVRLSELPMLSLTLDPNPGQFKVHPGG
LSWKKQGGNVIHIDKVDVTSVTWMKIPRCYQLKIRTTDGLVYMFSGFREQDTSNLTNFMQ
KNMGILPDEKQLSVTGHNWGGIDIDGSTLTFMVGSKQAFEVSLPDVAQTQMQGKTDVLLE
FHVDDTTGANEKDSLMELSFHVPMSNTQFVGDENRSSAQILWETILGEVDAGSSEAAVST
FEGIAILTPSIVRLFILPKSNNPHTMVVVTLDPPIRKGQTLYPHIVIQFETETVVEINVK
LSTELLAEKYKDRLEESYQGLIHEVFIKVLRGLSAAKVTRPGSFRSSQDGYAVQSSLKAE
DGLLYPLEKGFFFLPKPPTLILDEEIEFVEFQRLGARGAGMSSHNFDLLVKLKNDQEHLF
RNIRRSECQNLSNFINGKHLKMMNLGDGQGTSGGVTDVIHDSGDDTVDPHLERIKNQAGD
EESDEEDEDFVLDKDDGGSPTDDSGGDESDASESGDEKEKSSGKKASSSKPPAKRKPKGG
EGEDSEKRKRKSKKDPNAPKRAMTPFLCFSISERAAVKGSNPDLHSNEITKKLGLMWQKM
STQEKQPYIQQSLVDKKRYEEESAAYLGANLADEDPISADD
Download sequence
Identical sequences I1HCS2
15368.BRADI2G05430.1 EG:BRADI2G05430.1

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