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Domain assignment for EG:BRADI2G22320.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI2G22320.1
Domain Number 1 Region: 266-348
Classification Level Classification E-value
Superfamily RING/U-box 4.59e-29
Family U-box 0.00056
Further Details:      
 
Domain Number 2 Region: 394-646
Classification Level Classification E-value
Superfamily ARM repeat 7.4e-25
Family Armadillo repeat 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G22320.1   Gene: BRADI2G22320   Transcript: BRADI2G22320.1
Sequence length 680
Comment pep:novel chromosome:Brachy1.0:2:19854597:19856929:-1 gene:BRADI2G22320 transcript:BRADI2G22320.1
Sequence
MANARNAAAAGSPSSSSSSYSSSAPDAEILRSLHRLARDLAAAEAPAPFLRAVFASVSRR
AKLLVAVFDDLLGVVGRLPRSASLCLREVLLVLQRFKAVVADCSARSRMRLLLQSDEVAA
RVRELQHDLATLLDILPAATELGLADDVADLLALASRQCRRPAPEAAAEQELKASVLRLI
QEVEQEIVPERERLEAILDEVDINDPASCSEEIEILEREIGDRLAERWTPAMIALVGLLR
YAKCVLFSAATPRPLDSKADLGDGDDDGAEPPAPPLDFRCPISLDLMRDPVVSASGQTYD
RESITRWFGSGKSTCPKTGQVLTSLELVPNKALKNLISRWCRENGVAMEGSEPGKPEPAP
LATANKAAVEAARMTASFLVKKLTASFSPASDNRVVHEIRQLAKSGTESRAFIGEAGAIP
LLVPMLQSEDAALQLNAVTALLNLSILEANKKRIMHAEGAVAALCHVMGSGATWRAKENA
AAAVLSLSAVHSYRRRLGRNPRVVEKVLLLVRTGPASTKKDALAALLCLSGERENVGKLV
GAGAVEAALSAIGEEETAAAVLASLAKRGGAEAIVNVDGAVARLVAEMRRGGTDWSRECA
AAALVLLCRRAGAAAVAQVMAIPGVEWAIWELMGSGSERARRKAASLGRACRRWAVANAE
QTTECPTNSTTVTLPVMAAS
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Identical sequences I1HIF6
EG:BRADI2G22320.1 15368.BRADI2G22320.1 XP_003566140.1.954

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