SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI2G53540.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI2G53540.1
Domain Number 1 Region: 667-910
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.03e-62
Family Protein kinases, catalytic subunit 0.00013
Further Details:      
 
Domain Number 2 Region: 43-350
Classification Level Classification E-value
Superfamily L domain-like 9.52e-57
Family Polygalacturonase inhibiting protein PGIP 0.00079
Further Details:      
 
Domain Number 3 Region: 304-527
Classification Level Classification E-value
Superfamily RNI-like 1.8e-43
Family 28-residue LRR 0.084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G53540.1   Gene: BRADI2G53540   Transcript: BRADI2G53540.1
Sequence length 932
Comment pep:novel chromosome:Brachy1.0:2:52681787:52685549:-1 gene:BRADI2G53540 transcript:BRADI2G53540.1
Sequence
MAAATSAAPALLLGALLLVAAATTAALTDDVLALVVFKTGVADPLGRLAAWTEDDDRPCS
WPGVGCDARTGRVTSLSLAAESLSGRLPRALLRLDALLTLSLPGNNLSGPVLPSLLGSLT
RLRSLDLSSNRLAAAVPADLFAQCREIRSLSLAHNELSGYIPTDVASCSSLVSLNLSSNR
LAGPIPDGLWSLPSLRSLDLSGNALSGSVPGGFPRSSSLRAVDLSHNLFAGEIPADIGEA
ALLKSLDLGRNFFTGGLPDSLRRLSGLRFLGVGSNALVGEVPAWIGEMWALERLDLSGNR
FTGAIPDDIANCKNMVEADLSRNALTGELPWWVFGLPLQSVSVAGNKLYGWVKVPGDAAL
SLRSLDLSSNGFSGGIPPQIPTFASLQSLNLSSNSISGQMPAGIGGMRLLEVLDASANHL
NGSMPPEIGGAVALRELRMGRNSLTGRIPAQIGSCRSLVALDFSHNEFTGSIPSALGNLT
SLQVVNLSQNKLNGTLPVELSNLPSLHIFDVSHNSLSGGLPKSRFFDNIPAYFLSDNSGL
CSSRKNNSCSTVMPKPIVLNPNSSLNPLSQATPSSPSSMHHKKIILSVSTLIAIAGGAAI
AIGVITVTVLNRRVRAAASRSKPAIALSDDYLSQSPENDASSGKLVMFGKGSPEFSAGGH
ALLNKDCELGRGGFGAVYKTVLRDGQPVAIKKLTVSSLVKSRDDFERQVKLLSKVRHHNI
VTLRGFYWTSSLQLLIYDYLPGGNLHKHLHECTEENSLSWMERFDIIIGVARGLMHLHQH
GVVHYNLKSSNVLLDSNGEPRVGDYGLAKLLPMLDRYVLSSKIQSALGYMAPEFTCKTVK
ITEKCDVYGFGVLALEILTGRRPVEYLEDDVVVLCDVVRSALEEDRLEDCMDQRLCGEFP
MEEAIPIIKLGLVCTLAGAIKPARHGRGGEYT
Download sequence
Identical sequences I1HSW7
EG:BRADI2G53540.1 15368.BRADI2G53540.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]