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Domain assignment for EG:BRADI2G60850.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI2G60850.1
Domain Number 1 Region: 772-831,1069-1093,1130-1259
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.86e-35
Family Tandem AAA-ATPase domain 0.0033
Further Details:      
 
Domain Number 2 Region: 699-857
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.09e-20
Family Tandem AAA-ATPase domain 0.011
Further Details:      
 
Domain Number 3 Region: 232-277
Classification Level Classification E-value
Superfamily F-box domain 0.00000000903
Family F-box domain 0.0048
Further Details:      
 
Domain Number 4 Region: 276-303,342-368
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000185
Family Extended AAA-ATPase domain 0.085
Further Details:      
 
Domain Number 5 Region: 983-1032
Classification Level Classification E-value
Superfamily RING/U-box 0.0000194
Family RING finger domain, C3HC4 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G60850.1   Gene: BRADI2G60850   Transcript: BRADI2G60850.1
Sequence length 1306
Comment pep:novel chromosome:Brachy1.0:2:58114936:58120387:-1 gene:BRADI2G60850 transcript:BRADI2G60850.1
Sequence
MGDDGGGTVRRRLAGYLRAVLSVPAADAGSLRPLSPCSLSACGAVPLAPLTDSGGGRGGN
RTAPRGSARWRACGGGGSSVVRQLKSLVAQRCVEVEGRVLRVMARRGEGGEVVEARAVVL
VDVYLPAAAWSGWQFPRHRASAAVAVFKHLSCKWDARNALVDFDWSSHDNPHCDDQYTWS
CTDCHVLGCEIHQRSSISNNEKSFDLHEIFKVLPSVRVEKGMQITRIIPDNILDNAPGLG
IWSLPDDILNKVINRLKPRDLIRVASTCHHLRALASSIMPCMKLKLFPHQEAAVEWMLKR
EQNSEPLPHPLCKDFCTDDGLRFYINVTSGEIFTGNAPTINDFGGGMFCDEPGLGKTVTA
LSLILKTHGTLANPPKGVDVKWCTHKPDKKYGYYEFSASDSSNRTDFVSGTERLAGKDDV
IREDPSSSDLSHNGGSVPSTRSSRKRGRLVGPDLTSVNMHVMGEKSPEPCNSLPMPATQV
LKFKKNSKNVRKNLMNAYSKDSVGSKRKRGTALEFNDTWVQCDGCRKWRRLSDKTDLDST
TAWFCSMNADAARKTCTAPEESWDSKGKITYLPGFHKKDALPGDEQNVSFFTNILKDNVS
SINSETKKALSWLAQLSLKKHVEMESVGVTRPVLDARATIGKGARPYYKIFQAFGLVRKI
EKGVTRWYYPSMLDELAFDSTALGIALENPLDIVRFYLSRATLIVVPANLIDHWTTQIQR
HVSSDTLNVYAWGDHKKPSAHILAWDYDIVITTFNRLSAEWGPQKRSVLKQIHWYRVILD
EGHTLGSSLALTNKFQMAVSLVASNRWILTGTPTPNTPTSQVAHLHPMLKFLHEEVYGQD
HQSWDTGIHRPFEAQMEEGRIRLVQLLQRTMISARKANLRNIPPCIKNITFVDFSEGHAK
SYNELVVTIRRNILMADWNDPSHVESLLNPKQWKFRATTIRNVRLSCCVAGHIKVEEAGQ
DIQETMDDLMKLGLDPSSEEYQSIRYALLNGTDCIRCGDWCRLPVITPCQHLLCHDCVAL
DSEKCIKCGNNYEMQSPETLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWQSTTSSKV
AYLVDKLRSLREANIKHRHSTNITNGAGLAIESSYQDDNNVEVRLPQAMSHKVIIFSQFL
EHIHVIEQQLTIAGITYAGMYSPMPLSTKRNALTKFQDDPTCMALLMDGTAALGLDLSFV
NHVFLMEPIWDRSMEEQVISRAHRMGATCPINVETLAMRGTIEEQMLKLLQDSSACRNIV
NKGASSTENEGARPHRSLHDFAESSYLAKLSFVKGSNKACADANTS
Download sequence
Identical sequences I1HV84
15368.BRADI2G60850.1 XP_003567474.1.954 EG:BRADI2G60850.1

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